Detailed information on ENST00000607799

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000424496 sense_intronic sense intronic ENST00000607799 554 241 noncoding Trans
TCONS_00116668 desmoglein 3 novel protein coding ENST00000607799 510 248 UTR3 Trans

Sequence

>TCONS_00116668 (746 nt)
GCGCATCTTCGCTCTGTTGGCCGTGGCTTTAGTAAGCACACACCTGCCTGCTACTCTGGTTATCGTGGCGACGGCAGGTCTGGATTGCCAGACAGGTTTT
TCTTTTTACCTCGAGGCTTTCTCTGAAGGGAGTCGGAGCATTTAAAAGGCGGCCTCAAGGTGGATTGAGTCGGGGGAGGATTAGCAGTATTTGCTTAGGT
TGTAAAACCGCGACTTTATCTAATAAATCGCCATTCAAGGTGCAAATACAAACTTGGAACAGAGGTGGAGTCTCGCTCTGTCGCCCAGGCTGGGGTGGAG
TGACGCGATCTCGGCTCACCGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGTCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGTCCACCACCAC
GCCCGGCTAATTTTTTGTACTTTTAGTAGAGACGGGTTTCACCGTGTCAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCC
CTATATGTTTTAAAATATAAATTTATTCTTATAAAAATAAATTTAAACTAGATTGAGGTAGTAATTACAACAGTCCAGCACATTATGGATAATTAATATT
TATATTTATTTGGCTGGTTTTTCTTTTATAGTAAACTTTATGCCTTAATGAACATTTATCAGTATGACTCACTTCATTCAGTCATTGAATAACTATTTAT
TGAGGCTGTATACTGTGCTAGGTAGGCATGGAACTACATGCATGATC

Expression



Full and truncated open reading frames discovered in TCONS_00116668

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.