Detailed information on ENST00000608032

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000261596 lipin 2 protein coding ENST00000608032 1150 403 CDS Cis

Sequence

>ENST00000608032 (720 nt)
GCACAGACAGACTCGACAGAAAACATGCGGAGGCGGCACAGTGCAGTTGCCACCAAAACTGAGCTTTAGACAAACCTAAACTACAGAGTGGTGCTTGGAG<br />AGTCAGAAAACTTGGGCAGCCACCAAGGGGAAGCCAGGGTCCCTGGCGCAGAAGAGGCCAGAGAGGCCACATCTTCTGCACACCTGAGGCCCGATGGCCC<br />TGCAGAAGGGAGGCAGGTTGGGAAGTGCTAGCGAAGGGCCAGCACTGACCCTGGCTCTGGGGTGATCCAAGGACGCAGCTCAGAACTGCTTAGAAGAGGA<br />GCCGGAGCTGCCTGAGGAAATGGAATGGCAGCCACAGAAACGATGGAAAAGCGTCCTTCGTATAAATTCTGGGGCAGATCTGCACCTGCAGGACCTCCCC<br />AGTTGCTATAGATATTTGGAATAGATCAAGTGAAAACCGAACAAGCAGAACAGATGCCTCATTTTGCTTACAAAACTGCTTTGAGAATTGGGACGTGGCT<br />ACACCCCACGAAGTACATCCCTCTGAATTTCACCCACATCAGAACCCAGAGCCCAGGAGATACTCACATTTGGACGGTTTCCAAAGGCAGCATAGAAGGG<br />CTGCTTAGACGGGGCAAACAGATTCTTGATATCATTTAGACACTCAATTTTGAACTTCTCTGGTTTCTTTTCTATCACTTCTCTAAGAAAAAAATACAAA<br />TACAATCACCAATCTCAAAA

Expression



Full and truncated open reading frames discovered in ENST00000608032

In silico ORF/peptide predictions
>peptide 1 (61 aa)
MPHFAYKTALRIGTWLHPTKYIPLNFTHIRTQSPGDTHIWTVSKGSIEGLLRRGKQILDII


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to Swiss-Prot:
sp|Q92539|LPIN2_HUMAN (Evalue: 3.0E-17)