Detailed information on ENST00000610159

lncRNA-RNA interactions

Number of interactions: 13

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000263955 serine/threonine kinase 17b protein coding ENST00000610159 567 302 UTR3 Trans
ENST00000338758 parvin, beta protein coding ENST00000610159 609 420 UTR3 Trans
ENST00000494969 colony stimulating factor 2 receptor, al... protein coding ENST00000610159 510 305 CDS Trans
ENST00000494969 colony stimulating factor 2 receptor, al... protein coding ENST00000610159 614 301 CDS Trans
ENST00000549365 DNA-damage regulated autophagy modulator... nonsense mediated decay ENST00000610159 524 271 UTR3 Trans
ENST00000568559 transmembrane protein 170A nonsense mediated decay ENST00000610159 503 263 UTR3 Trans
TCONS_00135884 zinc finger protein 347 novel protein coding ENST00000610159 524 319 UTR5 Trans
TCONS_00153158 serine/threonine kinase 17b novel protein coding ENST00000610159 567 302 UTR3 Trans
TCONS_00175015 copine IV novel protein coding ENST00000610159 638 436 UTR5 Trans
TCONS_00175016 copine IV novel noncoding ENST00000610159 638 436 noncoding Trans
TCONS_00222612 carnitine O-octanoyltransferase novel protein coding ENST00000610159 517 298 UTR3 Trans
TCONS_00222619 carnitine O-octanoyltransferase novel protein coding ENST00000610159 517 298 UTR3 Trans
TCONS_00222623 carnitine O-octanoyltransferase novel protein coding ENST00000610159 517 298 UTR3 Trans

Sequence

>ENST00000610159 (5334 nt)
AGACAACTGAGAGGAAGGAGGTACCACGGGCACTCTCTCGCGAGAGGGCCGCAGAGCCGCCTTTGACGGGGGCGTGTACCTGGAGAGCAACGGTAAGGAC<br />GGAGCCGACGGCTCCGGCGTCGGGTCGGTTCCGGCATCGACGTATCGTTTGGTCGCCCCAGAGAGGAGACAGGTTTCTTCAGCTTGCCGCTGAGGATGTG<br />GCATCGGCTGCGCTCACCGCCGCCGCCTCTGTGAACTGCGGGAGTTGGGACAGCGGCCAGGGCTAGATGGGTGGGACGCGAGTCCTCGCCGAAAGCTTGC<br />CCTGTGCGGGGCGCACTTGGAGGCGAGCTCTGGGCCGTGGCGAGTTTTGCAGCCTAAGGTCTTGGCAGGCGCATTGCTGTGGGCTGCCGGAGAGCAGGCT<br />GGAGTTCGAGACCGCCCACCGGAGAGCAGGCGAGAGTTCGAGGCCTAGGTACAGCGCATTTCGCTAGGCATCCCCAAGAATATCCGCGTGATCCTTGTGG<br />CCAGAGTTTGTTGAGCTAATATCCCCAGCCCAAACAGTAGAGCACATCACATGTCGGCCACCTGGGAGCGTTGAACCTGGTAGTTACTAGGCGCCCCTGG<br />TGGAAATAAAACTCATTATGCCCTAGTTATGTCTTAGTGCCTGGGTGACGATGATGTAGCGGTTAAAGATTAACTGAGCGCACTTAGAGGTTGTCTTTGT<br />CTACCTAAGGAAAATATCAATAGATTAAACCCCCAACCTTAAAGAATCTCCGTGAATTTTTCTGAGGAAACGTGCAATATTGTCATACAAAAGGCCCCAA<br />ATATGCAAACATTGCTTTTTGTTAAAAGTTTGTTTTGTTTTGCAGTGACATCTGTTTGAGCAGATGAATATGCCATTGGGAAAGTCAAGGACTGTCGGAG<br />AGGAGGACATGGCAGACCTTAACTAAAGTGAGGGGGACAGTAGAGCACTAAAAGTTCTAGGAAAGGAGATGAACTGCTTATTCCATCAGATGAAAATATA<br />GTCAGAACAGATGAGTAGTAGAACTTAAACATGCCCGGAGTTGCCAGGAATTTGCAAAAGCCTTGATATAATTCCTGTTGCTGTAGAAAGACTTTCTACA<br />GTCACTAATATATCAAGTTATGTTCACTAGAAAAAAAGTTTACTTAGTTTATAGAAATGGGCTGAAAAATCCTAATTACTTATCTGTGAGGTTATTTTCA<br />TGAAGGTTAATCATCCAGAAACTATTAGAGAGCCTCGGAATATATTTCTTCTAATCTGCTCTACCTATCCCATTCAAAGGAGGGAATCTGAAGATTTAAG<br />GACAAAGAGCAGTTGAAAACTCAGAGCTGTGGTTAATGGGAGAATTTCAAGGATGGTGAAAAAAACTAACATCATTGCATCCCTGTTTTTTGTATTCTGG<br />ACTTTTTAGTTTAGCTCTTGGTAAACTACATCAGAAATTCTTTATGCTAACTCTAACACACATTTTGGGGTATTGCTAATTTAATCTTTGAATACTGTTT<br />TTGCTGTTTCATGATTATATGTTATGTCCTACCAGCTAGATTGCCAACTCTTGACTACTGACTGGAAGTTTATTGTTTATTCAGCAAATAATGAATTAAG<br />TCAGTGAAGTGAGAGATTTCGTGTGTAAGGATTGTTAACTTGAACATTTCACCAGTTACACACAGTTCAGCCCTACTTAAATTTTAAAAATCATTGTTGG<br />CACTTGACATTGTTATGAGGAGTTTTGTATTTTCAACTTGTATTTTGAGAGTGTCCTCATGTGACTGAAGTATGTGCTACTCTTCTTAATTGAATAACCC<br />CAGAATCTCCAGAATTGATAATTGGAGGAAATTCTACTGTTGGAAAGAATGGATGGATTATACAGCCCTGTTTTTTGACTGTTCATTTTGTCCTTGGAGT<br />CACTACCACTTGGCCTCAAAGTGTGAACATGTAACCCTTTCCTTAATACTTTGCTACACAGCTGAGCAGAAACTGTAAATTTGGATCCTTTGTCAGTACA<br />ACTTAAAATGGAACAATTTCAATGGCTTAGGGTAAGATAAGTATGTAAAGATACTTTTGTAATAGAAGAAAAAACATTGGATATTAAAATCACACAGTAG<br />TACCTGGGTGTGGTGGCTCATGCCTATAATCCCAACGCTTTGGGAGGCCAAGACAGGAGCACTGCTGGAGGCCAGGAATTTGAGACCAGCCTGGCCAACA<br />TGGTGAAACCTCGTCTCTACCAAAAAATACAAAAATCAGCCAGGTGTGGTGGCACATGCCTGTAATCCCGGATACTCGGGAGGCTGAGGTGGGAGAATCG<br />CTTGAACCAGGGAGGTGGAGGTTGCAGTGAGCTGAAATCGCAAAACTGCACTCCAACCTGGGCAACAGAGTGAGACCTCCTGTCTCCAAAAAAAAAAAAA<br />AAAAAAAAAAAAAGTGGGTGTGGTTGTGTACACCTCTACTTCCTGCTACTCAGGAGGCTGAGGCTGGAGGATCTCTTGAGCCCAGGAGTTCAAGTCTGCA<br />GTGAGCTATAGTTGCACTGCTGCACTCCAGCCTGGGTAGCACAGCGAGACCCCCATCTCTAAAACATAAAAGTAAACAGGCTGGGTGCAGTGGCTTACAC<br />CTGTAATCCCAGCACTTTGGGAGGCCGAGGAGGGTGGATCATGAGGTCAAGAGTTGAGACCAGCCTGGCCAACGTGGCGAAACCCCATCTGTACTAAAAA<br />TACAAAAATTAGCCAGTCGTGGTGCCAGGTGCCTTTAATCCCAGCTATTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCTGGGAGACAGAGGTTGCAG<br />TGAGCCAAGATCATGCCATTGCACTTCAGCCTCGGGGACAAGAACAAGACTGTGTCTCAAAAAAAAAAAAAAAAGTAGAAAACAGAATAGCATAAGGATA<br />ATCTTATATACAAAATAAGACTACTCAATTTCTGAATTTTTTTTTTAACTAGATATGCCACCTCCTGATGACAGTGCCCATTTCGTAACTTGTCTTACTC<br />AGAAACAGCTCTTAGATAATTTTACTCTTTAAGTTCAGGTCTGAGCACAGAGGACAAAGAATTCCCTTGATTGCCTATGAAAGAAAGGATTCTCAACCTT<br />GGCACTATTGACATTTTAAGTCAGATAATTCTTTGTTGTGGAAGGTTATCCTGTGCATTGTAGGATGTTTATTTTATCAGCATCCCTGGCTTCTACCCAG<br />TAAATCCCAGTAGCACCCCACCACCAACCAAAACTGTCTCAAAATGTTGCTAGATGCCCCTTGGGGACAAAAATCCTCTCCCTCCCTCCTCCTTGAATGC<br />CACTGGCACTCCTTGAGCCTACAGAAGGGCTCTTCTCACAAGTTTGATACCCTGTACCTCCCAGTTGATAGTGGGAATTACTTCTCCTTTGAAGACACAA<br />TTCCAGTTACCCTGAGAAGTATGGCATTGGCCTTGCTGGCCTCCACCAAATTACTATATCACTGTGTTTGGTAACCCCAGACATCATACTAGGGCTTTAA<br />TTTCAGTATATAAATAGTAAATTAGTATCCTTGTATAGGTTAGCTTAATGAGTTTCAGAATTCTTCAAGTCATATCTTCATAGGTAGGATCACTGTGGAG<br />TTAATGGCATTTGAACTATGTACTCAGTACTATGCTAGTGGTTGGTGCAAGGGGAAGATACAAAATAAGGTGTGATTTTAGCCCATGAGGAATTTATACT<br />TTATCTGCAGAAGCAAATTAATATGGAACCGTTAGTGAACACCTGGATAAAACAGAATGCTAAATTTTACCCTAGAGGTGCTTGGCCTGGACTTCAAGAA<br />TTCTAAGTGAATTGAAGTATGTTCACAGTAAGAAAGGTTAAAAATGGCTCTGCCCACTTGTAGGCAGATGGGAAGCTAGGATGGCAGACTTGCCAATATT<br />TGATATATGTAAAAAGTGCAATCATGGCCTCTGTTGTTTCCTCTTTTATCTCGTTCTCTTTATTAGTCCAGGTTCTCTAGAGGAATAGAACTAATAGGAG<br />ATATATATATATATATATATGGAGTTTATTAAGTAGTATTAACTCACATGATCACAAGGTCCCAGAATAGGCCATATGCAAGCTGAGGAGAAAGGAAGGC<br />AGTCGAGTTTCAAAGCTGAAGAACATGGAGTCCAATGTTTGAGGACGGGAAGCATCCAACATGGGAGAAAGCTGTAGGCTGGGAGGCTAAGCCAGTCTAG<br />TCTTTTCATGTTTTTCTGCCTGCTTTATATTCTGGTCGTGCTGGCAGCTGATTAGATGGTGCCCGCCCAGATTAAGGGTGGGTCTGCCTTTCCCAGCCCA<br />CTAACTCAAATGTTAATCTCCTTTGGTAACACTCTCACAGACACATTCAGGATCGATACTTTGCATCCTTTAATCCAATCAAGTTGACTGTATTAACCAT<br />CACAAGTCCACCACTTGTCAACTTAAACACATACATATCTCCTGAGATCATTCATAATCTTCAAATAAAGACAATAATAATGTCATAATTACACCTAATA<br />CAACTATCCTTTGTACAGCTGGAAACACACCAGTCCCCAACCCAAATGCTATTACATAAAGTTAACAATACTTAAATGCTGATATGAAGTAAATCTTAAT<br />GTCCCATGATAAAAGGAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGAGTAATGGCTTTTGACAGTAATAGAGGGT<br />CTCAACCTGATTTTTCTTAAGTTTGCATAAGGCTTAGGAGAGGATAAAATAAGGCAGGATCTAGAGATTGGTGAGGAGAAACGGAAGTCCTCATTCTTGA<br />CAGCTCTCAGCACATGCAGCCCTCCCCACACACACAGTCACACTCACACACACTCACAACCAGATTCACATTCCTACCCATGCACACACTAACACACACT<br />TGTGCACTTAAACTCGTGCACTTACACATTCACATTCATATACTCACATGCACACATTCAAAACACACACATACTCTACAAACACTCATGTTGCAAAAGG<br />GGATTTGTAAGCTGAATGTTTAGAACTCAGAACACATATTTTCACAAAAATAATATTATGGTCGGGCGCTGTGGCTCACGCCTGTAATCCTAGCACTTTG<br />GGAGGCTCAGCTGGGCGGATCACTTGAGATCAGGAGTTCAGGACCAGCCTGGCCAACATACTAAAAATACAGAAATTAGCCAGGCATGGTGGTGCATGCC<br />TGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAAAGGTTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGACTG<br />GGCAACAAGAGCAAGGCTCCATCTCAAAAAAAAA

Expression



Full and truncated open reading frames discovered in ENST00000610159

In silico ORF/peptide predictions
>peptide 1 (87 aa)
TTERKEVPRALSRERAAEPPLTGACTWRATVRTEPTAPASGRFRHRRIVWSPQRGDRFLQLAAEDVASAALTAAASVNCGSWDSGQG

>peptide 2 (76 aa)
MLLDAPWGQKSSPSLLLECHWHSLSLQKGSSHKFDTLYLPVDSGNYFSFEDTIPVTLRSMALALLASTKLLYHCVW

>peptide 3 (69 aa)
MQPSPHTQSHSHTLTTRFTFLPMHTLTHTCALKLVHLHIHIHILTCTHSKHTHTLQTLMLQKGICKLNV

>peptide 4 (66 aa)
MGGTRVLAESLPCAGRTWRRALGRGEFCSLRSWQAHCCGLPESRLEFETAHRRAGESSRPRYSAFR


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT098474 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q8N2A0|CX062_HUMAN (Evalue: 3.0E-22)