Detailed information on ENST00000617922

lncRNA-RNA interactions

Number of interactions: 8

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00008758 flavin containing monooxygenase 4 novel protein coding ENST00000617922 519 301 UTR3 Trans
TCONS_00017068 calponin 3, acidic novel protein coding ENST00000617922 548 295 UTR3 Trans
TCONS_00039117 nicotinamide N-methyltransferase novel protein coding ENST00000617922 503 298 UTR3 Trans
TCONS_00148048 potassium voltage-gated channel, subfamily G, member 3 novel protein coding ENST00000617922 571 304 UTR3 Trans
TCONS_00148704 WD repeat containing planar cell polarity effector novel protein coding ENST00000617922 541 316 UTR3 Trans
TCONS_00148705 WD repeat containing planar cell polarity effector novel protein coding ENST00000617922 541 316 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000617922 516 287 UTR3 Trans
TCONS_00211163 opioid growth factor receptor-like 1 novel protein coding ENST00000617922 568 302 UTR3 Trans

Sequence

>TCONS_00211163 (4419 nt)
ATCCAGTGTATATATGTACCGCATTTCTTTATCCATCTGTTGGTGGATCCTTAGGTTCATTCCTTATCTTGGCTGTTGTGACTAGCAGTAAACGCAGGAG
TGCAGGTATCTCTTCGGCAGACTGATTTCATTTCCTTTGGATATATATACAGTAGTGGGATTGCTGGATCATATGGTAGTTCTATTCGTAGTTTTTTTTT
AGGAACCTCTATGCTGTTTTCCATAATGACTATACTAATTTACATTCCCAATAACAGTGCAGTGTATAAGAGTTCCCTTTTCTCCACATCCTTGCCAACA
TGTTTTTTTCTTTTTGATAATAGCCATTCTTACTGTGGTGAGATGATACCTCATTGTGGTCTTGACTTGCATGTCCCTAATAATTAGTGATGTTGAACAT
TTTTTCATGTACTTGTTGGCCATTTATATGTCTTCTTTTGAGAAGTGTCTGTTTGGCTCATTTGCCCATTTTTTTTTTTTTTCTTTTTGAGACAGAGTCT
TGCTCTTGTCGCCCGGGCTGGAGTACAGTGGCGCAGTCTCTGCTTACTGCAACCTCCGCTTCCAGGGTTCAGGTGATTCTCCTGCCTCAGCCTCCAAAGT
AGCTGGGATTACAGGTGCCTGCTGGCTGATTTTTGTATTTTTAGTAGAGACAAGGTTTCACCATGTTGGCCAGGCTGGTCTTGAGCTCTTGACCTCAGGT
GATCCACCTGCCTCGGCCTCCCAAAGGGCTGGGATTACAGGGGTGAGCCACCATGCCCGGCCCATTTGTCCACTTAATTTTTTTTTTTTTTTTTTTTTGG
CTGTTGAGCTCCTTGTGTATTCTAGATATTAATCCTTTGTCAAGTGAATATTTTGCAAATATTTTCTCCCATCCTGTGGGTTGTCTCTTCATTCTATTGT
TTCCTTTGTTGTACAGAAGCTTTTTTGTGTAATAGAATTCCATTTGCCTATTTTTGCTTTTCTTGCCTGTGTTTTTGAGATTTTATTCATAAAATCTTTG
CCTAGACCAATGTCCTGAAGCATTTCCCCTGTGTTTTCTTGTAGTAGTTTCAGGTCTTACATTTAGGTCTTTAATCCATTTTGATATTTATATATGGTGA
CAGATAAGGATCTAGTTTCATTCTTCTGCATATGGTTATTCTTACAGTTATCCTATTTTTCCAGTACCATTTATTGAAGAGTGCTTTTTTCCCCAGTATA
TGCTCTTGGTGCCTTTGTGAAAAGTCAGTTGGCTGTAAATGTGTGAATTTATATCTGGGTTCTCTATTCTGTTCCATTGATCTATGTGTCTATTTTTATG
CTAGTACCATGCTGTTTAGATATTATAGCTTTGTAGTATATTTCGAGGCCAAGTAGTGGTGATGCCTCCAGCTTTGTTCTGTTTGCTCAGGATTGCTTTG
GCTATTGGGGGTCTTTTGTGGTTCCATATTAATTTTAGAATTTTTTTTTGACATTTCTGTGAACAGGATCATTGGTATTTTGATAGGGATTGCATTGACT
CTAGATTACTTTGGGTAGTATGGTCATTTTAATATTTATTTTTCTTATTGGTGGATATTTACATTAATTTTGCCTTTGTTGCTGCTATAGGCAGTGTTAA
AGTGGTATTTAATAAATAATTTTTATCAGAAATTTCTAATAGCCACATCTGTTGTACACTTTTCATTTGTCTTTTTTATTTTTTTGCAACAAAGTCTTGC
TCTGTCACCCAGGCTGGAGTGCAGTGGTGCTCACTATAGCCTTGACTTCCTGGGCTCAGGCAGTCCTCCTACCTCAGCCTCCCAAGTAGTTGGGACTGCA
GGCGTGTGCCACCATGCCTGGCTTATTTATTTTTAATTTTAATTTTTGTGGAGATGAAGTCTCACTGTATTGCCTGGGCTGGTCTTGAATTCCTGGGCTC
AAGTGATCCTTCCACCTTGGCCTCCCAAAGCGTTGGGATTACAGACGTGAGCTACCCATGCTCAGCCTGTCATCTTTCTTGATTCCCATGAATATCTGCT
GTGTTTGGCTTTTTCTTTCTTGATATTCTTTGGAGGCTGGGAAGATACCGCTCTGTGGTATTCTCTCCTCCCTTTCTCCCTTCGAAGTCCTAACCAGGCC
TGACCCTGTTACAGCTTCTGAGGTCAGATGAGATAGGGTGCATTCAGGGTGGCTTAGCTGTAGACTCTCGTTTTCTTTTTTTTCCTTTTTTCGAGACAGG
GTCTTGCTCTTTTGCCCAGGATGGAGTGCAGTGGTGTGATCACAGCTCATTGCACCCTTGGCCTCCTGGGCCCAAGTGATCCTCCCACCTTAGCCTCCTG
AGTAACGGAGACAAACTTTATCTATTTTTCGTAGAGACAGGGTCTCACTGTATTGTCTAGGCTGGTCTTGGACTCCTGGGCTTAAGCAGTCCTCCTGCCT
CAACCTCCCAAATTGCTGGGATTACAGGCAGGAGCCACTGTGCCCAGCTTCTCCTTCCTTTTGCTAGATCTCTCTCTTGAAATGTGGTCCTTGACTTTTA
TTCCTAGGTAGGTGATCTCTCTTTCACTTTAAACTTTTTTTTTTCTTGCTGACATCCAACTGTTTAGCTCCAGCCTCTTTTTGAGCACCTTAGACACAAA
TGTATTTTGGGGTCAGGTACAACCCAGAAAATTCACCTCTCCTTCAGTCCCTCCTGCTGTGTTCCTTACACATATAGCATAGCCGTAAAGTTAGACCCGG
ATTCCAAATCTGCCTCTGCTACTTACTAGCTGTGGACCCCAATGGACAAGTTTATTACAAGAAAATTTAATCCTTTCATCTGTAAGTGGAATTAACAGTC
TCCATGTCATGGGGGCTTCGTAAAGGTTCATTGAGCCACTATGTATCTCACTGTGTACCTGGCACAGTGCTCGGCACTTAGTCACTGGCAGCTGTTGTAA
CTGCCACCTACATGACTAGAACCTTTCCGTAGCATATTGTCAAATCTACATTTTAAGTCTCTACAATCTGGTCCTGCCTTTATGTCCTCAGAACCCTTTC
CTGTGACTTCATGCTCTGTTGATACTGTCACCCAGGCTGGAGTGCAGTGGCACAATCACAGCTCACTGCAGCCTTGACACACTGGGCTTAAGGGATCCTC
CTGCCTCAGCCTCCCAAGTAGCTGAGACCACATGTGTGTACCACCATGCCTGGATGATTTTTTTTATTTTCTGTAGAGACATAGTCTTGCTAGGTTGCCC
AGGCTGGTCTCAAACTCCTGGGCTCAAGTGATCCTCCCACCTTGGCCTCCGAATGTTAGGATTACAGGCGTGAGCCAGCACAGCTGGCCTTCTGTTGACT
CTGTAAGTTCTTTGGTGGTTTTGCCCCTAGTTTTATCCCATCTGGTATCTGGTTTACAGCAGCTATTTCAAACACCTCAGTTAATTGTGGTGAGAATTTT
GTAAGATTCGGCAGGGTAGGGAGGATGGGGACAGGTTCTTGGGGTGCATGAATGAGTCCTGCTTTCTCAGCCTGCTGGCGGTTTTCCTTAATCTCTCTCT
TGCTTTGATCTCTCACTTCTTCCACATTCCTGGGCACCCACCCACATCCCTTACCCCAGACACTTGCTTCCTACCTAGATGCTACCTTGGTAGGGAGGTG
CAGCCTTGTCGCTGAAATGGAGGTAATGTGGGCCTGGGATTTGTGTCTTTTTCAGAACAGTGCAACCCTGAAACTCGTCCTGTTGAGAAAAAAATAAGAT
CAGCTCTTCCTACCAAAACCGTAAAGCCTGTGGAAAACAAAGATGATGATGACTCTATAGCTGATTTTCTCAATAGTGATGAGGAAGAAGACAGAGTTTC
TTTGCAGAATTTAAAGAATTTAGGGGAATCTGCAACATTAAGAAGCTTATTGCTCAATCCACACCTCAGGCAGTTGATGGTCAACCTCGATCAGGGAGAA
GACAAAGCAAAGCTCATGAGAGCTTACATGCAAGAGCCTTTGTTTGTGGAGTTTGCAGACTGCTGTTTAGGAATTGTGGAGCCATCCCAGAATGAGGAGT
CTTAAGATGGATTATTGTGCTGCTTGCTCAAGCGTGTGCTTGACTCCTGGAACCTGCCTGCTCCCTCTCCCAGACCAGCTAGTTTGGGGCTGGGGAGCTC
AGGCAAAAGAGGTTTCCAGGATGCAGATTAGGTCATGCAGGCCTTTACCGGCATTGATGTGGCTCATGTTTCAGGCAGACTTGGGGTCCTTAAGGTGGCA
AGTCCTTTATGGAGAGAAAACTTGACATTCAGATGATTGTTTTTAAATGTTTTACTTTTGGTACAGTTGATAGACATCATAAACGATATCAAGCTTACAC
TTCATATGGAGTTAAACTTGGTCAGTGTTAATAAAATCAAAACGTGATTCTACTGTACATTGCATTATTCATAATTTAATTGTTTGAAATTACATTAAAT
AAATCAACTAATTAAATACT

Expression



Full and truncated open reading frames discovered in TCONS_00211163

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.