Detailed information on ENST00000618835

lncRNA-RNA interactions

Number of interactions: 8

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000424496 sense_intronic sense intronic ENST00000618835 580 258 noncoding Trans
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000618835 557 254 noncoding Trans
ENST00000498813 delta(4)-desaturase, sphingolipid 1 processed transcript ENST00000618835 521 268 noncoding Trans
TCONS_00076763 protein phosphatase 1, regulatory subunit 13B novel protein coding ENST00000618835 608 265 UTR3 Trans
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000618835 541 264 UTR3 Trans
TCONS_00190999 zinc finger protein 721 novel protein coding ENST00000618835 623 264 UTR3 Trans
TCONS_00192322 tec protein tyrosine kinase novel protein coding ENST00000618835 614 266 UTR5 Trans
TCONS_00251977 G protein-coupled receptor 82 novel protein coding ENST00000618835 507 263 UTR3 Trans

Sequence

>TCONS_00251977 (2260 nt)
CATGTCCTCCTATGGGCAGAAAAGAGTCCTATTTTAATACCTAAACCAAAGCTGTATTGTCATAAGCCACTTCTTGATGAAATTGTGACACACACCTTAA
TATCACTTTCATAAATAGGAAATGGGAGGCTTTTCTCCTCATTTTATTATAAAGATGTCTGTGGGAAATTCTCTTAATTCATCCTCTTTAAAATTTTACC
TTTTAGCTAAAATGTCTCTGTTGAAATTCAAATTTCTAACTTAGTGAAATCGAAATCATTCATAGACTGTAGTATTGCAGGGCTCGAACTGTGCAGTGTT
CTGAGGTAGTTAAGAGCTTTGCTGGATTCAGGCCCTGGGTTTGCCCAGGCCTGTATGACCTTGAGCAAGTTATTCTGAGCTTCACTTTCTTCCTCTATGA
TGGAGAAAATAATGATAGCACTTACCTCTATAGAGTTATGAAAATTTAGTAAGATAATCCATGTATGCATTTAGCACTGTTGAGATCTTGGCTTACTGCA
AGCTCCGCCTCCTGGGTTCACACCGTTCTCCTGCCTCAGCCTCCCGAGTAGTTGGGACTACAGGCACTGGCCACCACTCCCTGCTAATTTTTTGTTTTCG
TATTTTTAGAAGAGACGGGTTTCACCGTGTTAGCCAGGATGGCCTCGATCTGACCTCGTGATCCTCCCGCCTCGGCCTTCCAAAGAGCTGGGATTACAGG
CATGAGCCACCATGCCCAGCCTATTACTCTTAAGCCTAGTTATTTAAATCAAACATTTAGTGAGCTCTTACATGATGTTATAGGAGACTCTGAAGATTCT
CAACTGTTGATTCCTGTTCATAAGGCAGTTATAGTCTTGTTGAGAACTAAGTTTTATGCAGATAAATAAACTAGAAAGTGTATGGTGAATTGCCGAAAGA
GAGAACAAAAGTACTGTCAGTGCGCAGTAACTGGGAAGAAAACAGTAGTCCAAAGTAGAGGGGCCAAACTTTGAGGAGGAGGCTTTGGAGTCTGGAAGTG
AGGAAAGAGTGGGAAGGGCATTTTATGCTCTGACAGCTACAAGAGCAGAGTCAGAGATATTTGTAACTCCCAGTTAGGAGATTTGAATAACAGAAGTACT
CTTGAGTATATGGTGACAAACCTTTATTTTTTATTTACTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCTGGCTGGAGTGCAGTGGCAT
GATCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTTCTGCCCCAGCCTCCCAAGTAGCTGGGACTGCAGGTGCCCACCCCCATGCCCAG
CTAATTTTTGTGTTTTTAGTAGAGATGGAGTTTCACCATACTGGCCAGGCTGGTCTCGAACTCCAGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGT
GCTGCGTGAGCCACCGCACCCAGCCGACAAACCTTTATTACCAGGTGATATCAAATATTATTAGAGCTGACTGTGGTAGTGACAGTTTTTCATATAAATG
AAATTGCATCCTCCCAAAGGAATCCTGAGTATGTATGCACTTTAAAAGAACCCAGAATCATCTAAATATTGTCACATGGCTCTTGCAAGTGATGATAATA
GTGATGCTTATAATAATGAGGATTAGCTGCACTCATCAGCCTGTAGAAAGTAAAAAGTTTCCTTTTCGAAATTTCCTTTCTTGTTAAAGAATAAATCATA
AGTGTTAGAAATAATAGTTTCTTTTAAAGACTAACTTCCTTCAAGCCTCCTCTGCTCTGTGCTAATGACTCTTCATTAAGCCCTATCCTATGTAGCTGTT
AGATATAAGGGAATAAGTATATTCTATGTCCTTGTACTTTAACCAAGATATTTGTGCTGGACATGCTCACAGGCACGTTCCAGCTTGCAGCCTATGCCCC
TTCCTTATTTGGAAATATTATTACTTTTCTAAGTCTTTTTGCAAGCAACTTCTTCTTTTCCTTTGTTCTCTATTGCCTTTCCCTATATAGGAAAGTTTTA
AGTTATTAGCCAGTCGGGTTTAATTTAAATTGTGAGGTCCAGCTCCAGCCAATGGAGACAGGACACAAGCTGCATAAGGGATAAAAACTGCTTCCCTCCT
TTGTTCGGGTGTGCTGTCACCATTGTTTCATCTGTGAGGAGCACCCTTTCTGCAGAAAGTAAAATTGCCTTGCTGAAAAAACTTTTTGTCTAAATGCTGG
TTTTTCCTTGCAGTACCTAGGAGCAAGCATTCTGTTTCTAAATAAACATTTTACTTGTAAC

Expression



Full and truncated open reading frames discovered in TCONS_00251977

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.