| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000470361 | potassium large conductance calcium-activated channel, subfamily M, beta member 2 | processed transcript | ENST00000619697 | 567 | 285 | noncoding | Trans | |
| ENST00000475187 | THO complex 5 | retained intron | ENST00000619697 | 654 | 285 | noncoding | Trans | |
| ENST00000569455 | cadherin 13 | processed transcript | ENST00000619697 | 630 | 287 | noncoding | Trans | |
| ENST00000604000 | Lix1 homolog (chicken) like | protein coding | ENST00000619697 | 685 | 291 | UTR3 | Trans | |
| TCONS_00006081 | processed_pseudogene | novel protein coding | ENST00000619697 | 603 | 285 | UTR5 | Trans | |
| TCONS_00033132 | dynein heavy chain domain 1 | novel protein coding | ENST00000619697 | 673 | 284 | UTR5 | Trans | |
| TCONS_00108999 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR5 | Trans | |
| TCONS_00109000 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 536 | 283 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR3 | Trans | |
| TCONS_00109012 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR3 | Trans | |
| TCONS_00109013 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR3 | Trans | |
| TCONS_00109014 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000619697 | 629 | 284 | UTR3 | Trans | |
| TCONS_00114628 | phosphoribosyl pyrophosphate synthetase-associated protein 1 | novel protein coding | ENST00000619697 | 628 | 284 | UTR3 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | ENST00000619697 | 614 | 284 | UTR5 | Trans | |
| TCONS_00148048 | potassium voltage-gated channel, subfamily G, member 3 | novel protein coding | ENST00000619697 | 601 | 285 | UTR3 | Trans | |
| TCONS_00150689 | ectodysplasin A receptor | novel protein coding | ENST00000619697 | 615 | 284 | UTR3 | Trans | |
| TCONS_00186316 | KIAA0232 | novel protein coding | ENST00000619697 | 603 | 284 | UTR5 | Trans | |
| TCONS_00203663 | ribosomal protein L3 pseudogene 6 | novel protein coding | ENST00000619697 | 621 | 279 | UTR3 | Trans | |
| TCONS_00235393 | processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) | novel protein coding | ENST00000619697 | 644 | 284 | UTR5 | Trans | |
| TCONS_00235708 | oxidation resistance 1 | novel protein coding | ENST00000619697 | 607 | 285 | UTR3 | Trans | |
| TCONS_00239255 | tumor protein D52 | novel protein coding | ENST00000619697 | 625 | 288 | UTR3 | Trans | |
| TCONS_00243477 | osteoclast stimulating factor 1 | novel protein coding | ENST00000619697 | 608 | 285 | UTR5 | Trans | |
| TCONS_00243482 | osteoclast stimulating factor 1 | novel protein coding | ENST00000619697 | 608 | 285 | UTR5 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000619697 | 617 | 284 | UTR5 | Trans |
>TCONS_00252827 (1418 nt)
CTTTCCTTTAGGCTGTGGGTCAGAGTCTACACTTCACTAAACCTGGGATGGAGGCGTGGAGGACTTGCTTCGCGGCGTTTGCGTCCTCGCAGGCGCCTCG
CAGGGCTTCCTGCCCTCACGGCGGGGGAGTAGCTTTGGCGAAAATCAGCACGAGTTCTGCAGTTTTTCCAAGCGCTTTTAGGGTGTAATCGTCCCAGGTT
TCTAAGCCAAGGCCCGGAGAGTTGACCCCCTCGCAACAGCTTGTGTGTCCTTGCAGCGCCGCGGGTGCCACCTGGTCTCCGCCTCAGCGCTGCCTCGGCT
CCTTCGGTTCCCACCAGCGGGAACGACCGTCCCCACTTTCAGCTTAAACTCATCTGTCCTTCTGGATCCAGCTCAGAGGTCTCTTTGTGATGCCCTCCTG
GAACTTCCCCCCTAGTAATCCTTCCTTTGTATTCCCGTGGCTCTTTGATAATAATGGTTGGAGTCCTGAACCCGACCCTTTGTATCGGACCGTGTTTGTC
ATCTCCAGTGCTTTATGAAGGCCTTGAAAGCAAGGTTCAGCCGTCTGTATTGGTCATCTTCCCATTGCCAGTGCCTACGAAGGGCTTGACCCATTCATTG
TTAGACGCTCAGTAAGTGTGTATTGAGGCAGCCCTCTGTGCCACTCCAGGGCTCTTTCCACTAAATCATGAGTATGTTGGTTTACCAGATGGAATGAGTA
GCCTCTTCTTTGGATACATAAACACCCGATGGATATTGTGGGTCACTGTGGAGGGAGAATGAACGTATGGGATCCCTGACCTGTGGTTACTGGAAAACAG
TTGACATTTAGAGAGAGGCTGAATTCTTGGGCTTCCCGTAGCCCCCATCCTGAGTGTGCCAACAGGGACTAGAAGCATCTCTAGTCTGCAAAGCGAGGAA
CAAGTGATACTCTGTCCAATTTTTCCAATATTGTTATACTCATGAATAGAGATTAATGAAATTGAAGAGCATATTCAAGAGAAAGACTAAAGGAGAAGTC
GTCTGCCCCGTGGACAGGCAGCTTGAGTGGTGCTTGAGAAAATGTACATGAAATTGCTTGTTAAAAAATATTCACGCCTGTAATCCCAGCTCTTTTGGGA
GGCCGAGGCGGGCAGATTACTAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCCCTACTAAAAATACAAAAACAAAATTAGCCGG
GCGTGGCGGCGGGCGCCTGTGGTCCCAGCTATTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAACGGAGATGGCGC
CACTGCACTCCAGCCTGGGCGAGAGAGCGAGACTCTGTCTCAAAAAAAAAAAAATTATATATATATATATGTATATATCCATCAGAGACATGTAAAGGAT
TAAAGTACGATACACAAAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.