Detailed information on ENST00000621689

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000549365 DNA-damage regulated autophagy modulator 1 nonsense mediated decay ENST00000621689 537 264 UTR3 Trans
TCONS_00135884 zinc finger protein 347 novel protein coding ENST00000621689 519 260 UTR5 Trans

Sequence

>TCONS_00135884 (416 nt)
TTCAGCCAGGAGAGCGCTGAAGGGATCTGAGCTGAGAGCAAGTCTCAAACTCAGAGAATGGAGGAGCTGCCCCGGAAGTGGCTGCTCGAGGCTGCAGTGA
ACTATGATCCTGCGGCCAATCGCGGTGGCTCACGCCTGTAATCCCAGCCTTCTGGGAGGCCGAGGCGGGCGGATCGCTTGAGGTCAGAAGTTCGACACTA
GCTTGGCCAACATGGTAAAACACCGTCTCTACAAAAAAATGCAAAAATTAGTTGGGTGTGGTGGCGCGCGCCTGTGGTCCCAGCTACTCAGGAGGCTGAG
GTGGGAGGAACGCTTGAGCGGGGGAGGCGGAAGTTACAGTGAGTCGAGATCGCCCCACTGCACTCCAGCCTGGACAACAGAATGAGACCCTGTCTAAAAA
TAAAATACATGAGCCGA

Expression



Full and truncated open reading frames discovered in TCONS_00135884

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.