| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000227155 | CD82 molecule | protein coding | ENST00000624101 | 648 | 295 | UTR3 | Trans | |
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | ENST00000624101 | 538 | 284 | UTR3 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000624101 | 517 | 282 | UTR5 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000624101 | 523 | 266 | UTR5 | Trans | |
| ENST00000498813 | delta(4)-desaturase, sphingolipid 1 | processed transcript | ENST00000624101 | 518 | 271 | noncoding | Trans | |
| ENST00000524750 | CD82 molecule | protein coding | ENST00000624101 | 563 | 241 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000624101 | 579 | 267 | UTR3 | Trans | |
| TCONS_00001594 | lincRNA | novel protein coding | ENST00000624101 | 662 | 299 | UTR5 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000624101 | 609 | 283 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000624101 | 587 | 284 | UTR3 | Trans | |
| TCONS_00034642 | CD82 molecule | novel protein coding | ENST00000624101 | 648 | 295 | UTR3 | Trans | |
| TCONS_00034643 | CD82 molecule | novel protein coding | ENST00000624101 | 648 | 295 | UTR3 | Trans | |
| TCONS_00101169 | myosin phosphatase Rho interacting protein | novel protein coding | ENST00000624101 | 519 | 270 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000624101 | 531 | 252 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000624101 | 507 | 268 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000624101 | 504 | 286 | UTR3 | Trans | |
| TCONS_00133831 | carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) | novel protein coding | ENST00000624101 | 602 | 289 | UTR3 | Trans | |
| TCONS_00148048 | potassium voltage-gated channel, subfamily G, member 3 | novel protein coding | ENST00000624101 | 662 | 446 | UTR3 | Trans | |
| TCONS_00192322 | tec protein tyrosine kinase | novel protein coding | ENST00000624101 | 611 | 269 | UTR5 | Trans | |
| TCONS_00251977 | G protein-coupled receptor 82 | novel protein coding | ENST00000624101 | 500 | 269 | UTR3 | Trans | |
| TCONS_00253055 | uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) | novel protein coding | ENST00000624101 | 613 | 265 | UTR3 | Trans |
>TCONS_00253055 (2058 nt)
CTCTAAGATGCTAAATAAGTCCAGATACCATGAGTCTCATGCCAAATGACTCTAAGCAATCTGGGACATAAGATGAGTTACTCTAGCTGTGGCTGTGGCT
ACTGAATGACAGAATCAAAAAGCTGTGAAGTGCTCAGCCAGAGGCTCAATCCACCAATCCTCACCCAGGGACCCCTATCAGTTTCACAAGCCAGAGGCTC
AATCTACCAACCCTCACCCAAAGACCTCTATCAGTTTCACTGGGCCACACAGAGGAGCTCCACCCCGAGGGCAGGCACCTGCTACATCCACATTAACCTC
ACACTGTCACACCAGCTCACCTGCCCAAATGTGGAATGAATGCTTCTCTGCATGGATTTTCCTGGGAAAAGAGTCACCAAGAGCAACTGTTTGCTGAATT
AGGATCAATGGTACACAAATGTCACCCCACTTTGGGAACCTTGAACCCACCTCAGGGACTATACTGCATGGAAGTAAAAGGAGAAGGACAAGATAAATTA
AGTCCCTTGGTCCACGCTCCTCTACACCAAACAGTGCCTCTGTGACCCGTCATCTGCTTTGTATCTTGAACTGCCTCTCAAGTTACCATTGCAAATGCCT
AGCAGATGTCTGATATGTAAACACAGTTGCACAAATGAGTCAATGAATGAATTAATAAATCAATGAACAAAGAAAAGTAAAAGGAGTTTTTTGGGATTTT
TTTTTTTTGAAACAGAGTTTCACTCTGTCACCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCGAGCAATTCTC
CCGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCATGCCACCACACCTGCCTGATTTTTATATTTTTGGTAGAGACGGGGTTTCACTATGTTGGCCA
GGCTGGTCTTGAAATCCTGACTTTGTGATCCGCCCGCCTCGGCCTTCCAAAGTGCTGGGATTGAGCCACCGCACCCGGCCTAGTAAAAGGAGTTTTTAAA
CCACCATAGTAGATGGCTCCGTAATATTTTAAAGTCCTAGCCAAACCTAGAAACCTATGATTCTCAGGTTTTCATTTAACCTGCTGTAAAATACAGGGAA
ACCAATTTAACTGTATGCTTTGAAGTCTTCTTTTAAATGTTATCACATATGTTACACTTGATTTAAGAGATGTTAGCCTCTTTGAAAACCTTTCTGAAGC
CCACTCACGGAGAGGCTAGATGCTGTTTATTCTTGGGGTGGACATGTCCACTATTTTTTATTTATTTTATTTTTTATTTTTATATTTTTAGACAGTCTCA
CTTTGTAGCCCAGGCTGGAGTCCAGTGGCACAATCTCGGCTCACTGCAAACTCCACCTTCCAGGTTCAAGTGATTCTCGTGCCTTAACCTCCGTGAAGCT
GGGATTACAGGCACCTACCACCACATCTGGCTGTTTATTTATTTAGAGACAGAGTCTCGGTGTGTCACGCAGGCTAGAGTGCAATGGCACTATCTCAGCT
CATTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCACAGCCTCCCAAGTAGCTGGGACTACAGGCACCCAGCACCACACCCAGCTAATTTTTT
TTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTGGATCTCCTGACTTCGTAATCCGTCCGCCTCGGCCTCCCAAAGTGCTGGG
ATTACAGGCGTGAGCCACCGCGCCCGGCCTCGGCCTCTTTTTTAAACAGTGTATTAGCTGACCATTATGACCAAAGCCAAGTCAACAAGACCTCCCCAGA
GAAAGAAGGGAAACCAAGTCTGAGCCACCTCTAGTTTCATATGTATGTAAATTATCATGGAGGGCAGCACGGTGAACAGATGGAGAACAAAGGCATCCAT
CTGGGAAGGTCAGGAGGCTGTGGCAGGACCGTGAGAGAGGGGACATCAGGCTGACCCCAGGCAGTGGGCTAGCAATGAGTGTTTCTCTACTGTTGCTGAA
CTTGCCAAGTCCACAAGCTTGATCTCCCCAAGCTTAATTTGCAAAGTGCAAGATTCCCA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.