Detailed information on ENST00000624444

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00107851 transient receptor potential cation channel, subfamily V, member 1 novel protein coding ENST00000624444 602 288 UTR5 Trans
TCONS_00107864 transient receptor potential cation channel, subfamily V, member 1 novel protein coding ENST00000624444 602 288 UTR3 Trans
TCONS_00119961 ring finger protein 152 novel protein coding ENST00000624444 615 288 UTR5 Trans
TCONS_00135884 zinc finger protein 347 novel protein coding ENST00000624444 559 271 UTR5 Trans

Sequence

>TCONS_00135884 (7627 nt)
ATGAGCCACTGTACTGAGCTGTGCCTACTTCAAAAGACTGAAAATAAAAAATCAATAAATCTTTGCCAAATTAAAAAACAAAACAATAGTTTCCAGGTCT
TAGACAAAGACAATTCTGTGTCATGAAGAGTGGCAAAAGGCTTATTTAGCTGTTAAAATGATTTGCTTATATTTCAAAGAAGCAGAGAAAAAAAGATACA
TATAAAAGTTTTCCAGGCCAGGCACGGCTGTTCATGCCTGTAATCCCAACATTTGGGGAGGCCAAGGCAGGAGGATCTCTTGAAGCCAAATGTTTGAGTC
CAGTACAGGCAACATGGTGAAATTCTGTCACCATAAAAAAATAAATAAAATAAATATGGCTGGACATGGTGGTTCACGCTTGTAATACCAGCACTTTGGG
AGTCGGAGGCAGGTGGATAATGAGGTCAGGGGTTCGAGACCAGCCTGGCCAAAATGGTGAAACCCTTTCTCTCCTAAAAATAATAACAATAAAAAATTAG
CCAGGCATGGTGCTGTGCGCCTGTAATGCCAGCTACTCAAAAGGTTGAAGCAAGAGAATTGCTTGAACTTGGGAGGCGGAGGTTGCATTGAGCTAAGATC
ATGCCACTACACTCTAGCCTGGCCCACAGAGCAAGACACTGTCTTGAAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAAGTTAGC
TAGGCCTGGAGGTGCATGCCTATAGTCCTAGGTAATTAAGAGGTTGAGGCAGGAGGACTGCTCAAACCCAAGAAGTTAAGGTTATAGTGAGCTATGATTA
TGCCATTGCACTTCAGACTAAGCAAAAGAGTAAGATTCCATTTCAAAAAATTACTAAAAAAAGTTCTCTAAATTACATTGTTTAAGAAAAGGGAAAAGAA
AAAATATCTTTTTTAATTTTCAAATGGGAGAATAGAGCCTCTCATTTCTAATATGTATTTCCTTCTGCAAAAACATGGTCTAGGCCCATGGTCTTGAACT
ACTGGACATCTGAATTTTAGTAGGTGCTGGATTCAGGCAACTGAGGGGTGGCTTGGACACACTAAGTGCACGTAAATAAAAGGTTTGAGGTGAACTAAAA
GGTAAAAGAGGGGAAGGTGCTATTAAGAACCCACAGTTGGGAGACAGTACAGGGTTGGTGGAAGGACTGGTTCATGCTACAGATACTGACCCAGGTGAAA
CTTTACTCTGACTTATTTCTGTGTCCATGCAGGAAGACGAGATTATGATCAGGTGGCACAGAAACCTGGGATGGTGAAAAAACCAGGTTGCCCCTGCAGA
TTCGGTGTCTGAGGTAGAACGTATGCCAGGGGTCTTGTAGGCACATGTGTGGGTTTTTGGTGGGAAAGTCTATGAGGAAAGGTAGCATGGGCAACAATCT
TGATGCCAAAGCCTTGTCCTGAGAGGGGCTTGGCCACATCAACATGCAGTGTGTATGTTCAGTGGGTGAAAAACCTGTGGTGGCCTCAGGTTGGCAGGAG
GGTAGAAGGCATCTGTTCTCAGAACTTCTTCCCTCAGAGTCGTCGGTCCTTCTTACCATGGGAGAATGCCTGGAACCACAGGGCAGTGCATGGTGTAGCA
GCCTGTGTGCAGAGCAGAGCCTACCTTCCCCGAGACACCTGGAGTCTCTCTCCAGCAGAGGCCCCCACATTGTCTTTCTCCTTACAACACTTTTGATCCT
AAATGTGTAAAGTTCCCTGAAAACCCACTGCTTCTCCAACACCCATTTGTTGCCCCAAAATTTAATTCTGACACAACTTAGAGTTCACACAGATCCCAGA
AATTCAGGGCTCAGTCCCACATCACCCCTCTCACTGTAGAGGAGAGTTACACATCCCTGAAGCCCATCTACACTTCTGAGCTACCTCCTATAAATCTGAG
ACTAGCATAAACCCCTTTTCAAGTTAAATAATTTGATAGAATTACTAAAAAGAAAACCTCAACAAATAACTGTAATTATATTTACTACTTTATTATAAAA
ATATAACTCAGAAACAGCCAAATGGAAGAGATGTCTAGGGCAAGGAACAGTTGTGGGTGAAGGCAATCCTGGAAATAGCTATATTTAAAGAAATTCCCCC
ATTCTTTGCATTCTCAAAGAACAGCTTAGTGAAGAGAAACGTGCTTCCCCTGATGACTTTGAGGATGCTCCCTGCTGTTTTTTTAACCTATCACAAAAAT
GGACACAGATTGCAAATTCCCATTTTTAAAAATGAACAACCATTCAGTAATTTAGTCTTCAGTGGTCCAAATAACATACTCTTAAAGAAACTTTGCTTGT
TTCTCTTCTTCCAACCAGCCCCTGAACTTTGACTCACCCACAGCTTCAGCAAACCTACAACCCTTATTTATACATACCCCTCCTAAGAACAGGCTGAGTT
CAAGGTGAAACATTATCTTATCTGGGATCGCATTTTGCTACCCTCCATCGTGTGCTTCCTTTCCAACCTTCTTTGTAAACTTGTTTTCTCCTCCCTATGA
AATAAGGCCCTTTTCCACCTAACCTTAGAGATACTCAAAGATCTAATCATTTGTACTTTTTCTTTGTTGCAATACTTCTTAGGTAACTTCTTAGACCAAG
TCTAGAAACAGTCTGAGGACAATAACAATTCCATTCTAAAAAGAATCTCCCAACATTTCTTCTATCTCAACCTCAACTGCATCTGCCTGTGAACTTCCAG
CTTACCAAGGCTCTATATCTTCTGGCAGTGACAAAGGCTCCTTCCATGGTTGGTGTGAGTAGGCTTGGACACCTGCAGGGCAGACACCCAGGAATAATCA
ACTGGGCCTTCAGTGGTCCTCTTTTGCAGGGTCAAGGTGGGCCTTAGCTTTTAGTCAATGGTCTAAGACTTCTATTTACCAGTTAGTCATTCAGTTAGTT
TTCAATTCAAAAAATACTTCATGTTTGAAGAATCCAGCAAAAATTATTCAAATCTAAGATATAAAAGAGAGGAAATTACAGCCGGGCATGGTGACTCATG
CCTGTAATCCCTACATTTTGGGAGGCCTAGGCGGGCAGATGACCTGAGATCAGGAGTTTGAGACCAGCCTGACCAACATGAAGAAACCCCGTCTCTGCTA
AAAATACAAAATTATCCAGGTGTGGTGTTGTATGCCTGTAATCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATCGCTTGAACCCAGGAGTTGGAGGTTA
CAGTGAGCAGATGTCTTGCCATTGCACTCCAGCCTGGGCAAGAAGAGTGAAACTACATCTAAAAAATAACAGAATAAAATAAAATAAAAACATTATAAGG
GGCTTATATCTTATAATTCATCAAGAAAAGCCAAAGTATCTATCCCTTTCAGAAAATAAACATGTAATTTAATTATGTTCAAAACAAATCATTTAGTAAA
CAATTAATCATATGTGAACACTTCCAGGAGGTGCAAAGTCCCAGCTCCTAAAACTTAACATTACCCTCAAACACCCAGATGGCAGCATATGGAATAGAGT
TATTCACTTTCACAAGTTCTCTCTTTTGAAAAAAAGAATAACTTATGTGATAAATTTATGTAATTTGACAATTAATCTACCTCATGTGCTTGCAGATATG
TATTCATTTCCTACCACCGTAGTGGAAGAGAGATTTTCCCTATCTTTACAACTGATAGCATTTCCAACAGTAAGCTGTGAGATTCTGCTTGAAATCACCT
CTCAAACAAATAAAAAACAGACCTGGGAGACATGCTACACTCATTCTGCTGAGGAAATAGGGCAAGAATATTTTCTAAGACCCCGAACTCCAGATATGCG
ATGGGGCAAATCCTGAAGCGTACATGGCTATCTCTCACAGCTAAAGCACCCCTCACCCCTATCCAGCGCTTCTTACCCCTGGCGCAAGAGAGTCACCTGC
GGGGAGGAAAACTATCAAAATCCCTTAAACCCAAGTTGTAACCGCACAACTAAATCAGAATCCTTGGAGCTGGATCTGAAAAAAATACGGTTGAAAGTTG
TGCAGGTGATTACAATGTGTAGGCAAGCCAGAAAACCATGGCTTTAACGAGCAGCTTTTGTTAGAAATGATTTCTCAAATGAATGTAAAAACGTTTGCTG
CTGAATTGTGACCTTTCAATTTTACCTGCTTTTCCTGCAAAGTATATTTTGCAGACCCAGGCTGGCTTGTCCTTCTGTTCATGGTTCACCCAGTGCCGTG
TGTGCTCAGTGCATCCTGTGCACGGGTCACTGTGCTGTGTGCGCTGGCCGGGGTGAGCATCATTCTTCGGGGAGAACCTTTCTGAAAACAAAGCTGCAAT
CCAAAAAGTTAAAACCATGCTACTTACTGTACTGAGGTAAAAATTAAAAGACCTAGGGGACTCTTCCAAAAGTTAAAACGTAAATAAATATCTTGGAACA
TTAATATACACCTGACGATGTCCTGAGTGAACACGCCCCACTTTAAAACAAAACAAAACATTACTATTATTCTAAAATATTAATTTAGGATTGTTATGCA
AATATGTACTATTTAAATATTTATTGATGAATAACATGCATACAGCAATATAGGAACAAAATATTTATGGAATGCTTGATGAATTATTACTAAATAAATA
CACTTGTGTATGTAAGAATCAGATTTGCTCATGCCCTTGACACTTTCTCCTTCCCAAAGGTAACCAAGACCTTAAGAGCTAAGTGTAGATAAACTTTGTC
ATTTTCTACACGTGTTTTATTACAGAACATTAAAAACGTATACATAATACAAAAAAAGGATAACAGACCAGTCACCCAGATTTAACAGCTACTAGTCATG
TGTCATTTTTGTTTCACCTATACTTCCAGCCATTTCCACCCCAATTTCATTATTTTTTAGCCTTTTTGGATAAAATGTATATTCATTGCAAGGTACAATG
TGAACTGTGAATAGTAGAGAGATGGGGTTTCACCATGTTGACCATGCTAGTCTTGAACTCCTGTCCTCAGGTGATCCACCTGCTTCGGCTTCCCAAATTG
CTGGGATTACAGGCATAAGCCAATATACTCAGCCTGAGAATTTTTTCATACTTCTAAGAAAGTACAAATCCATAGGGCACATGAGAACTGCAATGTCTAT
CTACAGTAAATACAGTTTGATAAATAAAATGAAAGGCAATTGACCTAAGGTGAAAAGAAAAACAAAAAACAATCAAAGCATGGGTACTATGTGTCATCTG
TAAGAGCATTTGGTTAAGAATAACAAACAAACCAGTTTTATCGTTTTAATAGCCGAAATTGGCAAAATTTCTAGTTTTTCTTTCATAGGAATGCTCTTTG
CAAGAAAAAATTTTCATATAGTGAGAGCAAAAATGGCAACCATTTGCAAGTAAATGTCTTATGAAATTAAGTAGCAGATATCAAGCTCATGACCTTCAGA
TAGTTACCCCTAACTCAATCACTTACATAGCAAGTGCAGATAATTTTCATAGCTCCCTATTAAAATTATATTTGAATGCCCTTACAAATTGTGACTGTTT
TTAAATAAAGTTGACCAACTAAAATTTTGTATATGACATATGATAAATTCCCCTTCAAGTCACCTTACATTTACTTAATTTTATTAGGCAGTGTCTGTCT
ACCACCCAATAATACTTGACGATTCTCCCTCCATTTGCACAGGCATCATAGCTGGGAAACGGATTCACAAGACCCAGGCTGTTCCCTACATATGTTTCCT
CCTCCGACATCAGTTCATCAGTCAATCAAGCCATGTGAGAGTGGAGGCCTTGTATTCCCTATTATTCTTGGGCACTCTACTCCAAGTAGGAAAAGGCCAG
GAGGTCCTGTTAAAGGATGCACTCAGAGCCCGGGCTCCCTAACATATGAGAGTGCTAACCAGCAGGTGTAGACTTTTCAGGAGTGAAGAATGAGGCAGGC
ATTCCAAACCTGGACCTTCATCACCTTTTGTTTCATCTCAAGACAATTCTGAGGGACTGTTTTGGAGCGTGTCTGGAAGGTGAACCTTGAAGAAGAGTGT
GGGCTTTGATGTGACTCAGTTGAGATCTTTCATGGGGAGGCAGGAATTCAATGCCCAGAATCTGGGCTGGTGTCTTTGAGGTCAGTAGGTTGCGTCTTTG
TATCCAAGTCCATTGTTACTAGGTTGGAGGCTGGAGATTCTAAATGGCTTCCAGACCATCTCTCTGATTCTCTTTGGGAGATGGGGTCTGAAAGACAATG
TCAGTAGTTTTGGGAAATTCTAGAAAGTGTGCTTGGAAACGTGGGAAGAGCTCTTGCCTAGTGCCTAAATGCTCCATTTGCAGCTCTAGCCAAGTAGATA
CTTGGTAGGTATAGAGCCGGGTTTGCGTTTATATCAGCAAAACCTATGTCAGAGTTGAAGAAGTAGTCAGGAAAAAGCGTCTTGGTCGCAGGCCGGGGAA
CATCTTAAAAGCAAACTTCTAGCCTGCTGACTCTTGGCAATGAGTGTTGGATCCTGGCTAAAGTGCCTTGAATGCAGCATGAGGCCAATCCATGAATCCA
ACTTCTCATGGAGAAATGTTAATATTTTTTCAGTTTGAATCAATCAGGGTGAAACTACCATGCTATTGGTTTGCTTACTTTTTATTATTTCATGTAAAAT
CTAAGACAAAATACATTAAATGCTTATTGACATATGTATTTATTCTTCACCAGGCTGATAATATCTGCCTAATTTTAAACTTTCTTCCATTTTGTAGGTT
TCAACTTATTCTATTGTAAGATACTGTTAAATCTAATAGAGGCATTGTCACTTTTACGTATAATTTTATTTTATTTCATATATTTCCTATTGGCTTTTTA
CATTTAAATTATGGAGCACTTCATCATATAAAAAACTTCAATTATATTTAAACAGTAAGTCTTTGGATTTTTTTGCCTTGTAATTTCCATATTACATAAT
AATGAGATAAACATTAATGTTTTCAGGGTACTTTAAATTTTAGATAATTACTCATTGTATTCATGTGAAATTTGTTTTTACTGCATGTGTGGGTTGGAGG
ACTGTTTTCACTTCTGATTCATCTTTACTCTTATCTCATCAGAGCTCATACCTCTTGTAGTTGGGGGATTGCAGTTTATAATTCCAATAAATGGGGCAAA
TTCAATAATAACATAATACAAATGAGTTTGAATGCAGGACAGGTCTTCAAAGCATACACAACATGGGCCTACATATGTACAACAATAATAATTTATAAGT
TACTGTTTGGATGGAAAGTAAAAGTACAGAAAATTTGTTAAAGGAAATTAAAATGGAGATCATGTCTCAATAATCTCTGAGCAGACAAAATTAGTTAGGT
CTCATAAGTGATCTCAACCTCGCTTGATTTGCAAATACAAACAAAACTTAAATTATTTCTTGTAGCTGCATATTGAAAAAAGAGAAATGAAGCTCAACCA
GTCAGAAGTAGCCAACAACCTTATATAAATAGAAACTGTCCAACAAGGTAAACAGACAAACAAAAAACAATAAAAAAAGTTGTGCTACCACCAAATGATT
TCTTTGTTTCTACATTTTTCAAATAAATACTTGCTTCTTACACTGTCAATGAAGCACTCAATATCTTTCCGTCTGATATTTTATAATTTATCAATTGCTC
TTACTCAAATAAACACTTTGCAATTTCA

Expression



Full and truncated open reading frames discovered in TCONS_00135884

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.