Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
TCONS_00138868 | WD repeat containing planar cell polarity effector | novel protein coding | TCONS_00003798 | 763 | 311 | UTR3 | Trans | |
TCONS_00138868 | WD repeat containing planar cell polarity effector | novel protein coding | TCONS_00003798 | 747 | 311 | UTR3 | Trans |
>TCONS_00138868 (310 nt)
GTTTCCTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTCAGTCATGAAGTCTT
TGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAAGGTTTAAGTCTTTAATCCATCTTGAATTAAT
TTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCAT
TGCTTGTTTTT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.