Detailed information on TCONS_00069817

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00150045 ankyrin repeat domain 36C novel protein coding TCONS_00069817 678 277 UTR3 Trans
TCONS_00150051 ankyrin repeat domain 36C novel protein coding TCONS_00069817 678 277 UTR3 Trans

Sequence

>TCONS_00150051 (426 nt)
ATAGAAGAAATGGATAAATTCCTAGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGAGCTGAAATTG
TGGCAATAATCAATAGCTTACCAATGAAAAAGAGTCCAGGACCCAATGGATTCACACCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTT
CTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCA
AAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTAT
CCACCATGATCAAGTGGGCTTCATCCC

Expression



Full and truncated open reading frames discovered in TCONS_00150051

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.