Detailed information on TCONS_00074623

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00135884 zinc finger protein 347 novel protein coding TCONS_00074623 558 258 UTR5 Trans

Sequence

>TCONS_00135884 (918 nt)
AAACCAGCTTGTCGGCGCCATTTTGTCTCGGCAGCGGTGGCCGTAGCTCCATCGCATTTTATGTTTCTGGCGAGAAGGGAACGGAGTTTTCATCAGGTAG
ATTGGTTTTTGTGCGGCCGTCCTCCACCGTTTCCTCCAGGACAGCACCTAGTCGTGGCCGGAGGAGTCTCAGAGCTGTCAGAAAGAATAAGACTGATTTT
ATGGGAAAATTAAGCAGATGCTCCAGTTTGAGAAACCTGGATCTGCGATCTGTTTGTGGTAAGTAATTTTACTTAGTTACTCTTAGGTAATCAAGACTGG
TCATGTTGCTCGTGTGTGTGTGTGTGTGTGTATCTGTGTATCTTTTGAAAAATGATAACCGGGCATGGTGGCTAAAACGCCTGAAATCCCAGCATTTTGG
GAGGCAGAGGTGGGTGGATCACCTAATGTCAGGAGTTCGAGACCAGCCTGACCAACAAGGTGAAACCCTGTCTGTACTAAAAATACAAAATTAGCCGGGC
GTGGTAACACATACCTGTAACCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTACAGTGAGCTTAGATCGTGCCA
CTGCACTCTAGCCTGGGCAGCAAGAGTGAGACTCGTCTCAAAAAAAAAAAAAACATAGAATTTGTTCAACTGTGCAGTTGTTTCTGTACACGAGTATATA
TTGAGAAGTGGAAATGATTGCTGTGTTGAATGTAGCAGCTTTCCTAAAGATTTAGTTATTTTATGGAAAGTTACATAATTTACTTATTTGTAACCAAAGC
AGACTTTGAAATTTCTATGTTGTCTTTTGCCCTATTCAATTTTTATTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTCCTCCAGGCAGGAGTGC
AGTGGCATGATCTTGGCTC

Expression



Full and truncated open reading frames discovered in TCONS_00135884

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.