| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000217185 | protein tyrosine kinase 6 | protein coding | TCONS_00134472 | 565 | 293 | UTR3 | Trans | |
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | TCONS_00134472 | 596 | 288 | UTR3 | Trans | |
| ENST00000552918 | spermatogenesis associated, serine-rich 2 | protein coding | TCONS_00134472 | 525 | 281 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | TCONS_00134472 | 517 | 288 | UTR3 | Trans | |
| TCONS_00010077 | Ras association (RalGDS/AF-6) domain family member 5 | novel protein coding | TCONS_00134472 | 591 | 285 | UTR3 | Trans | |
| TCONS_00028040 | ankyrin repeat domain 16 | novel protein coding | TCONS_00134472 | 649 | 287 | UTR3 | Trans | |
| TCONS_00039782 | GRAM domain containing 1B | novel protein coding | TCONS_00134472 | 645 | 288 | UTR5 | Trans | |
| TCONS_00050741 | spermatogenesis associated, serine-rich 2 | novel protein coding | TCONS_00134472 | 612 | 282 | UTR3 | Trans | |
| TCONS_00075813 | forkhead box N3 | novel protein coding | TCONS_00134472 | 618 | 286 | UTR5 | Trans | |
| TCONS_00075827 | forkhead box N3 | novel protein coding | TCONS_00134472 | 618 | 286 | UTR3 | Trans | |
| TCONS_00108999 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109000 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109009 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109012 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109013 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109014 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | TCONS_00134472 | 643 | 275 | UTR5 | Trans | |
| TCONS_00109427 | serine hydroxymethyltransferase 1 (soluble) | novel protein coding | TCONS_00134472 | 643 | 288 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | TCONS_00134472 | 635 | 291 | UTR3 | Trans | |
| TCONS_00150696 | septin 10 | novel protein coding | TCONS_00134472 | 622 | 277 | UTR3 | Trans | |
| TCONS_00165341 | TTC28 antisense RNA 1 | novel protein coding | TCONS_00134472 | 622 | 287 | UTR5 | Trans | |
| TCONS_00184373 | neutral cholesterol ester hydrolase 1 | novel protein coding | TCONS_00134472 | 638 | 307 | UTR3 | Trans | |
| TCONS_00194682 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00134472 | 639 | 287 | UTR3 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00134472 | 639 | 287 | UTR3 | Trans | |
| TCONS_00227594 | GLI family zinc finger 3 | novel protein coding | TCONS_00134472 | 508 | 217 | UTR3 | Trans | |
| TCONS_00235708 | oxidation resistance 1 | novel protein coding | TCONS_00134472 | 631 | 287 | UTR3 | Trans | |
| TCONS_00247058 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | novel protein coding | TCONS_00134472 | 632 | 290 | UTR3 | Trans |
>TCONS_00247058 (1479 nt)
AGTTCATACCCTATAATAATCTCCTGTGTAAAGTCACTGACCCATTTCCACTGCTGCTCTCTCATCTGCTGCTCTGAAGCCTAAACCATGGTGCCCAGAA
TCTTCGATGCAACTCATGAGAAGCTGGAGGACCTGGAGAAGCTGGCAACTCAAAAAGGCCAAAGGGTGCAGACAATAAAAGCCCCAGACAAGCGTATAGA
ACCACACGCCGTCTTTTTACTTGCCGTAAGTGTCATATTTTTCTTCTTTAATGTCACATAAGAGCAATATTTCCTTCAGGTATCTAATCACAAGAACCAC
TGCAAATTCTAGATCCATGAGATCAGTCTTTCTGTGGAGAATTCATGTAGAGATCCCTGATCACACACTTGTCAAATAGAAAGTTTCCCAGAAAATCAGA
TACCATGTGTTATGAAAGAAAAGAAAGTATCTAGTCACTAAACACCTAGTTTAGAATAAAACGCCAAACACCCAGTTTAGAATAATTTCCCAAAAAGTGT
TTTCCTAAAGTAACTGAAATTTTGAAAATTGTATGAGGAGAAAGTACATTTGATTTCTTCCTTTCTCTGACTCTTGCATCCTTCATTTTCCTTCTGCCTG
TGTTAATCCCCCAGGACTGCCATAATCAAGGGCACCAGAGGGGTGGCTTGAACAGGAGAAATTCAGTTCCTCACAGTTCTGGAAGCCAGAAGTATGAGAT
CAAGGTGTTGGCAGGATGGTTTCTTCTGAGGGTCTATCTCTTGGCTTATCCATGGCCAACTCCTCCCTGTGTCTTCACATGGCCTCTGTGTGTGTGTCTG
TGCCCTAATATCCTCTTCTTATAGGGACACCAGTCAGCTTGGATTAGGTCCTGCTCATATGACCTCATTTTACCGTAATCGCCTTTTCAAAGACCTTATC
TCCAAATACAGTTATATTCAGAGATACTGGGGTTAGGACTTCAACACATGAATTTTGCGGGAGACATAGGTCATCCCATATTAATGCCCAAACAAAATTT
ATTACTTCACATAGTCATGCCCCAAATGAAAATTAAACAACCCAAAATTAAATAGAATTTTTAAATTTCATCATTTCTTTATTATTATTATTATTATTTT
TTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGGACAGTGGCATGATCTCAGCTCACTACCAGCGCCACCTCCTGGGTTCATGCCATTCTCCTGCCT
CAGCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCACACCCGGCTCCTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGAATGG
TCTTGATCTCCTGACCTCGTGATCTGCCTGCCTCAGCCTCCCAAAGTACTGGGATTACAGGCATGAGCCACCATGCCCAGCCGATTTCTTTGTTTCTTTT
TTTTTTTTTTACTATTAATGTTATTTTTTATGAGAGAGAGCACGCCAAGTATTGCTATAAATATTAGGATTAATTCTATT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.