| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000263955 | serine/threonine kinase 17b | protein coding | TCONS_00148584 | 573 | 305 | UTR3 | Trans | |
| ENST00000375120 | OTU deubiquitinase 3 | protein coding | TCONS_00148584 | 562 | 310 | UTR3 | Trans | |
| ENST00000494969 | colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | protein coding | TCONS_00148584 | 551 | 305 | CDS | Trans | |
| ENST00000568559 | transmembrane protein 170A | nonsense mediated decay | TCONS_00148584 | 599 | 288 | UTR3 | Trans | |
| ENST00000593250 | centrosomal protein 76kDa | nonsense mediated decay | TCONS_00148584 | 500 | 303 | UTR3 | Trans | |
| TCONS_00008112 | nicastrin | novel protein coding | TCONS_00148584 | 516 | 327 | UTR3 | Trans | |
| TCONS_00065093 | UBA domain containing 2 | novel protein coding | TCONS_00148584 | 626 | 309 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | TCONS_00148584 | 626 | 309 | UTR5 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | TCONS_00148584 | 626 | 309 | UTR5 | Trans | |
| TCONS_00119512 | zinc finger and BTB domain containing 7C | novel protein coding | TCONS_00148584 | 512 | 289 | UTR3 | Trans | |
| TCONS_00153158 | serine/threonine kinase 17b | novel protein coding | TCONS_00148584 | 573 | 305 | UTR3 | Trans |
>TCONS_00153158 (1271 nt)
GGTGAAGGAGTGCAGACTGGGTGCAAAAGAGGTGTGGCGGGAGAGAGTTCGTTTCTCTCCTGCTGGAGCGGCTTTGTTAGCAAAGGAGGGTTATAATTAT
TCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGGA
TTTTCATGCACCTTACAAACTTCCATACAAGATGAAGAAACTGAGATACAGAGAGGTTAAGCAACCTGCCCAAAGTTACACAGCTATTAAGTGAGCAAGC
TAGGATTTGAACAGTCTGACTGAATTCAAAACCTAGGATTTGGAACTAGAAGACATGGATTTGAATCCCAGTTCCACCACTTTCCAGCTTCAGTTTACTC
CTCTGTAAATGGGAATGATGATAATACCCACCTCACAGGACTTTAAGGGACAATACCTAATAAAGTACGTGGAAACACTTTGAAAACCAGAAATTGGCTG
GGTGCGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGGGTTCAAGACCAGCCTGGCCAAGATGATGAAA
CCCTGTCTCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCC
AGGGGTGGGGGGTGCGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCTAGCCTGGGCAACAGTGTGAGACTCCGTCTGAAAATTAAAAAAACAAA
AACAAAAAACCAGAAATGGTACTTGTGCTATGATGATTTAAATATGTGTATATTCATTTATACACAATATGACTGTAAAGTAATAAGACTGGTTTTGTGT
AACCCTGCTTACACATTTTTTTCAGACACACTGTAACCTATTATCTATTATATGTTATTAGGTTTTAAATTTATATTATATTAAGAGACTGAGTGTTATC
AACTTTCGTTTGTTTCATTTTATGTAAGGCAATATACAAGAATATTTGGACAGCTTTTTGGAAATGTTCATAAATTTTGATCTGTTCTATTCATGTAACT
ATGTATGTACATGCACATCTGTATATGCACTATGTTATATCTATATTATAGATCTTAGGTAACAACAAACATATTTGTGTGAGTCAAAATGTACCTGTAT
ATGTATGTATGTATGTATATTTCTCTGTTAAAGCAGGAGAGCTAATTTCTCAATAAAATGGATTTAAATTTG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.