| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000389534 | zinc finger protein 841 | protein coding | TCONS_00173512 | 522 | 269 | UTR3 | Trans | |
| ENST00000409359 | Rho guanine nucleotide exchange factor (GEF) 4 | protein coding | TCONS_00173512 | 527 | 283 | UTR3 | Trans | |
| ENST00000426391 | zinc finger protein 841 | protein coding | TCONS_00173512 | 522 | 269 | UTR3 | Trans | |
| ENST00000594295 | zinc finger protein 841 | protein coding | TCONS_00173512 | 522 | 269 | UTR3 | Trans | |
| ENST00000621141 | G protein-coupled receptor 1 | protein coding | TCONS_00173512 | 520 | 283 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00173512 | 608 | 301 | UTR3 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | TCONS_00173512 | 611 | 300 | UTR5 | Trans | |
| TCONS_00135644 | zinc finger protein 841 | novel protein coding | TCONS_00173512 | 522 | 269 | UTR3 | Trans | |
| TCONS_00148387 | reticulon 4 | novel protein coding | TCONS_00173512 | 578 | 288 | UTR3 | Trans | |
| TCONS_00148389 | reticulon 4 | novel protein coding | TCONS_00173512 | 578 | 288 | UTR3 | Trans | |
| TCONS_00194655 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00173512 | 609 | 282 | UTR3 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00173512 | 645 | 290 | UTR3 | Trans | |
| TCONS_00199319 | sorting nexin 24 | novel noncoding | TCONS_00173512 | 614 | 301 | noncoding | Trans | |
| TCONS_00204896 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | TCONS_00173512 | 610 | 290 | UTR5 | Trans | |
| TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | TCONS_00173512 | 621 | 290 | noncoding | Trans | |
| TCONS_00204916 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | TCONS_00173512 | 621 | 290 | UTR3 | Trans | |
| TCONS_00243477 | osteoclast stimulating factor 1 | novel protein coding | TCONS_00173512 | 661 | 289 | UTR5 | Trans | |
| TCONS_00243482 | osteoclast stimulating factor 1 | novel protein coding | TCONS_00173512 | 661 | 289 | UTR5 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | TCONS_00173512 | 620 | 285 | UTR5 | Trans |
>TCONS_00252827 (1894 nt)
AGCAATCTTTTTCCTTGGTGATTATTCTATTTATTTACAAATAACTCATTTCATGTAAAATGCTGAATAGATTGTAGGGCTGCCATAACAACGTGTTACT
AATTAGGAGGTTTAAACAACAGCTATTTATTATTTCACAGTTCTAGAGGCCAGAAGTCAAAAATCAAGGTGTTGGTAGCACTGATTTATTTTACGGGCTG
TGAGGAAGAATCTGTTCCATGCCTCTCGCCTAGTTTTTGATGGTTTTCTGGCAATATTTGGCATTCCTTGTCTTGTAGAAGCATTACCCTAATCTTTGAC
TTCATCTTTACATTCTCCCTGTGTCTGTGTCTGTGTCCAAGTTTCATCTTTTTATGAGAACATCAGTCATATTGAATTAAGGGCCCACCCTCTTCCAGTA
TGACCTCATCTAAACTTAACTAATTAAACCTTCAACAACTTGATTCCAAGTAAGGACACATTCTGAGGTACTTGGGGTTAGGACTTCAACATATGAATTT
TTGAGGGAACACAATTCAACTCGTAACAGATGCATTATCAAATAAATGAATATTTATTTCTTAGACAATAATAAAATTTTGAAATATATATGACTCTTGA
CTATTTGCAAAGTTTTGTTCCCCCCAACTTGTTCTCACTTGTATTTTTTCTCATAACCATCTAGTTCAACAAGAAATACTTATGCTTTATCGGTTTGTTT
GTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAACCTCTGCCTCCCAAGCTCAAGTGATTCTC
CTGTTTCAGCCTCCTGAGTAGCTGGGATTACAGGCCCCGCCACCAGGACCAGATAATTTTTGTACTTTTAGTAGAGACGGGGTTTCACCATGTTGACCAG
GCTCGTCTCGAACTCCTGACCTCAGGTGATTCGGCTGCCTCAGCCTTCCAAAGTGCTGGGATTACAAGCGTGAGCCACTGCGCCCAGCCGCTTTATATCT
ATTTTATAAATGAAGCAAGCGGCATCCAGGGAGATTATCAGTTTATCAAATGCCTCAGTTTATTAAGTTACTGTGAACAAAAACATAGAAGTATTATCTT
CTGGTGTATGTTCTCTCTGTGGCTTTTTACATCCCTTAGGGTAATGCTTGTATCTATTTAAAGGAAAGGTGACATCAATAAAAGTCACAATGCTTATAGG
CTTCTATGATTATGTGAGAAATAAATGCTCTAGAAAAATGGCATAACATTTTATCCTCCAAGGCCAATGGCTACATTGTGGGATTTCTACTCAGCTAGAT
AATCTAGGAAACACCAAATAAATAAAGCAAAGTATTCCTGCTTTCAACATGCTTATAGCCTGTTAGGGAAGATAGAAATAATATGGAGTATGGTGTATAA
GAAAAGAAGATTAGAGAAACTATGATGAATTGCTCAATTGTGTGATTTAGACAGCAAACAGGGAATTAAATTTGAATGATTGGAGTATTCTTGGATGAGT
TTATTATGAAAATTGAACTTTAATTAGGGACCGGCGTGAGAGTATGGAGGCTGAAGCCATAGAAAGGAGAAATTATTCCAGCTGAGGCCAAAACATGAAC
CAAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAACTTACACCATCTGTTCACATCATCAGTTCTTCTGGTTCTCATGCTTTTGAACTTCAACT
GGCACAATTCCACTGGCTCTCCTTAGTCTCCAGGTTGCAGATGGCAGATTATAAATCTCCTTAGCCTCCACCTTTATAATCCTAACTATTACTGACACCT
CTTTGAGGACAAAGGAAGTAGCTTTCTGCAAGCCAAAAAGACCTCAGAAAAACAACAAATCTTCCAAACTCTTGATTTTGACTTTTTGCCTCCAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.