| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000075120 |
solute carrier family 2 (facilitated glucose transporter), member 3 |
protein coding |
TCONS_00218273 |
502 |
292 |
UTR3 |
Trans |
|
|
ENST00000217185 |
protein tyrosine kinase 6 |
protein coding |
TCONS_00218273 |
643 |
278 |
UTR3 |
Trans |
|
|
ENST00000323816 |
growth arrest-specific 7 |
protein coding |
TCONS_00218273 |
636 |
267 |
UTR3 |
Trans |
|
|
ENST00000327473 |
tumor necrosis factor, alpha-induced protein 8-like 1 |
protein coding |
TCONS_00218273 |
647 |
292 |
UTR3 |
Trans |
|
|
ENST00000336787 |
RAB27A, member RAS oncogene family |
protein coding |
TCONS_00218273 |
622 |
277 |
UTR3 |
Trans |
|
|
ENST00000378004 |
Rho GTPase activating protein 26 |
protein coding |
TCONS_00218273 |
685 |
268 |
UTR3 |
Trans |
|
|
ENST00000396307 |
RAB27A, member RAS oncogene family |
protein coding |
TCONS_00218273 |
622 |
277 |
UTR3 |
Trans |
|
|
ENST00000405000 |
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 |
retained intron |
TCONS_00218273 |
670 |
296 |
noncoding |
Trans |
|
|
ENST00000422247 |
centrosomal protein 135kDa |
protein coding |
TCONS_00218273 |
661 |
275 |
UTR3 |
Trans |
|
|
ENST00000424496 |
sense_intronic |
sense intronic |
TCONS_00218273 |
695 |
291 |
noncoding |
Trans |
|
|
ENST00000437099 |
growth arrest-specific 7 |
protein coding |
TCONS_00218273 |
636 |
267 |
UTR3 |
Trans |
|
|
ENST00000439138 |
transmembrane protein 98 |
protein coding |
TCONS_00218273 |
556 |
270 |
UTR5 |
Trans |
|
|
ENST00000442007 |
antisense |
antisense |
TCONS_00218273 |
617 |
271 |
noncoding |
Trans |
|
|
ENST00000477205 |
calcium/calmodulin-dependent protein kinase II gamma |
processed transcript |
TCONS_00218273 |
704 |
266 |
noncoding |
Trans |
|
|
ENST00000542869 |
protein tyrosine kinase 6 |
protein coding |
TCONS_00218273 |
649 |
299 |
UTR3 |
Trans |
|
|
ENST00000547865 |
spermatogenesis associated, serine-rich 2 |
protein coding |
TCONS_00218273 |
634 |
300 |
UTR3 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
TCONS_00218273 |
673 |
299 |
UTR3 |
Trans |
|
|
TCONS_00001594 |
lincRNA |
novel protein coding |
TCONS_00218273 |
713 |
300 |
UTR5 |
Trans |
|
|
TCONS_00004719 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
TCONS_00218273 |
712 |
290 |
UTR3 |
Trans |
|
|
TCONS_00004721 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
TCONS_00218273 |
712 |
290 |
UTR3 |
Trans |
|
|
TCONS_00011236 |
solute carrier family 35, member F3 |
novel protein coding |
TCONS_00218273 |
645 |
295 |
UTR3 |
Trans |
|
|
TCONS_00021902 |
protein tyrosine phosphatase, non-receptor type 14 |
novel protein coding |
TCONS_00218273 |
659 |
253 |
UTR3 |
Trans |
|
|
TCONS_00021903 |
protein tyrosine phosphatase, non-receptor type 14 |
novel protein coding |
TCONS_00218273 |
659 |
253 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
TCONS_00218273 |
635 |
269 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
TCONS_00218273 |
690 |
271 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
TCONS_00218273 |
626 |
267 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
TCONS_00218273 |
755 |
266 |
UTR3 |
Trans |
|
|
TCONS_00030132 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
TCONS_00218273 |
704 |
266 |
CDS_UTR |
Trans |
|
|
TCONS_00030584 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00218273 |
601 |
297 |
UTR3 |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00218273 |
619 |
296 |
UTR3 |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00218273 |
739 |
292 |
UTR3 |
Trans |
|
|
TCONS_00037377 |
NAD synthetase 1 |
novel protein coding |
TCONS_00218273 |
688 |
293 |
UTR5 |
Trans |
|
|
TCONS_00037377 |
NAD synthetase 1 |
novel protein coding |
TCONS_00218273 |
568 |
297 |
UTR3 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
TCONS_00218273 |
650 |
292 |
UTR5 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
TCONS_00218273 |
744 |
274 |
UTR5 |
Trans |
|
|
TCONS_00041296 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
TCONS_00218273 |
742 |
295 |
UTR3 |
Trans |
|
|
TCONS_00041298 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
TCONS_00218273 |
742 |
295 |
UTR3 |
Trans |
|
|
TCONS_00046540 |
sestrin 3 |
novel protein coding |
TCONS_00218273 |
615 |
298 |
UTR5 |
Trans |
|
|
TCONS_00050195 |
FYVE, RhoGEF and PH domain containing 4 |
novel protein coding |
TCONS_00218273 |
679 |
293 |
UTR5 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00218273 |
693 |
293 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00218273 |
699 |
287 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00218273 |
731 |
266 |
UTR3 |
Trans |
|
|
TCONS_00065093 |
UBA domain containing 2 |
novel protein coding |
TCONS_00218273 |
628 |
294 |
UTR5 |
Trans |
|
|
TCONS_00065094 |
UBA domain containing 2 |
novel protein coding |
TCONS_00218273 |
628 |
294 |
UTR5 |
Trans |
|
|
TCONS_00065858 |
ubiquitin specific peptidase 12 |
novel protein coding |
TCONS_00218273 |
524 |
294 |
UTR3 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
TCONS_00218273 |
721 |
294 |
UTR3 |
Trans |
|
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
647 |
268 |
UTR5 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
647 |
268 |
UTR3 |
Trans |
|
|
TCONS_00075834 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
655 |
267 |
UTR3 |
Trans |
|
|
TCONS_00075835 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
655 |
267 |
UTR3 |
Trans |
|
|
TCONS_00075844 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
509 |
292 |
UTR3 |
Trans |
|
|
TCONS_00075845 |
forkhead box N3 |
novel protein coding |
TCONS_00218273 |
509 |
292 |
UTR3 |
Trans |
|
|
TCONS_00075917 |
ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
novel noncoding |
TCONS_00218273 |
720 |
290 |
noncoding |
Trans |
|
|
TCONS_00082423 |
transcribed_processed_pseudogene |
novel protein coding |
TCONS_00218273 |
652 |
292 |
UTR3 |
Trans |
|
|
TCONS_00083866 |
RAB27A, member RAS oncogene family |
novel protein coding |
TCONS_00218273 |
622 |
277 |
UTR3 |
Trans |
|
|
TCONS_00088441 |
antisense |
novel protein coding |
TCONS_00218273 |
635 |
270 |
UTR5 |
Trans |
|
|
TCONS_00090939 |
nucleoporin 93kDa |
novel protein coding |
TCONS_00218273 |
666 |
296 |
UTR5 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
TCONS_00218273 |
626 |
298 |
UTR3 |
Trans |
|
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
TCONS_00218273 |
626 |
298 |
UTR3 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00218273 |
796 |
292 |
UTR5 |
Trans |
|
|
TCONS_00109427 |
serine hydroxymethyltransferase 1 (soluble) |
novel protein coding |
TCONS_00218273 |
698 |
297 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
TCONS_00218273 |
673 |
252 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
TCONS_00218273 |
706 |
269 |
UTR3 |
Trans |
|
|
TCONS_00118919 |
potassium channel tetramerization domain containing 1 |
novel protein coding |
TCONS_00218273 |
703 |
292 |
UTR3 |
Trans |
|
|
TCONS_00119049 |
GRB2 associated, regulator of MAPK1 |
novel protein coding |
TCONS_00218273 |
745 |
292 |
UTR3 |
Trans |
|
|
TCONS_00119477 |
zinc finger and BTB domain containing 7C |
novel protein coding |
TCONS_00218273 |
625 |
292 |
UTR5 |
Trans |
|
|
TCONS_00123889 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
TCONS_00218273 |
696 |
292 |
UTR5 |
Trans |
|
|
TCONS_00123899 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
TCONS_00218273 |
696 |
292 |
UTR5 |
Trans |
|
|
TCONS_00133831 |
carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) |
novel protein coding |
TCONS_00218273 |
662 |
295 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
TCONS_00218273 |
650 |
266 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
TCONS_00218273 |
630 |
291 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
TCONS_00218273 |
682 |
291 |
UTR3 |
Trans |
|
|
TCONS_00150696 |
septin 10 |
novel protein coding |
TCONS_00218273 |
738 |
271 |
UTR3 |
Trans |
|
|
TCONS_00160920 |
protein tyrosine kinase 6 |
novel protein coding |
TCONS_00218273 |
649 |
299 |
UTR3 |
Trans |
|
|
TCONS_00160924 |
protein tyrosine kinase 6 |
novel protein coding |
TCONS_00218273 |
649 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
659 |
286 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
722 |
271 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
659 |
286 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
722 |
271 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
659 |
286 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00218273 |
722 |
271 |
UTR3 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
TCONS_00218273 |
649 |
269 |
UTR5 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
TCONS_00218273 |
721 |
298 |
UTR5 |
Trans |
|
|
TCONS_00182611 |
processed_transcript |
novel protein coding |
TCONS_00218273 |
640 |
274 |
UTR3 |
Trans |
|
|
TCONS_00182613 |
processed_transcript |
novel protein coding |
TCONS_00218273 |
640 |
274 |
UTR3 |
Trans |
|
|
TCONS_00182614 |
processed_transcript |
novel protein coding |
TCONS_00218273 |
640 |
274 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
TCONS_00218273 |
638 |
297 |
UTR5 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
TCONS_00218273 |
638 |
297 |
UTR3 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
TCONS_00218273 |
673 |
259 |
UTR5 |
Trans |
|
|
TCONS_00190498 |
palladin, cytoskeletal associated protein |
novel protein coding |
TCONS_00218273 |
656 |
263 |
UTR3 |
Trans |
|
|
TCONS_00190799 |
sorting nexin 25 |
novel protein coding |
TCONS_00218273 |
671 |
268 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
TCONS_00218273 |
660 |
295 |
UTR5 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
TCONS_00218273 |
699 |
288 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
TCONS_00218273 |
638 |
292 |
UTR3 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
667 |
292 |
UTR5 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
632 |
271 |
UTR5 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
709 |
292 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
667 |
292 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
632 |
271 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
709 |
292 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
625 |
280 |
UTR3 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
663 |
298 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
734 |
267 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
665 |
280 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00218273 |
734 |
267 |
UTR3 |
Trans |
|
|
TCONS_00205414 |
prolyl 4-hydroxylase, alpha polypeptide II |
novel protein coding |
TCONS_00218273 |
758 |
286 |
UTR3 |
Trans |
|
|
TCONS_00215909 |
O-acyl-ADP-ribose deacylase 1 |
novel protein coding |
TCONS_00218273 |
521 |
305 |
UTR3 |
Trans |
|
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
TCONS_00218273 |
706 |
293 |
UTR5 |
Trans |
|
|
TCONS_00226572 |
diacylglycerol kinase, beta 90kDa |
novel protein coding |
TCONS_00218273 |
550 |
271 |
UTR3 |
Trans |
|
|
TCONS_00226753 |
cell division cycle associated 7-like |
novel protein coding |
TCONS_00218273 |
666 |
293 |
UTR3 |
Trans |
|
|
TCONS_00227594 |
GLI family zinc finger 3 |
novel protein coding |
TCONS_00218273 |
572 |
211 |
UTR3 |
Trans |
|
|
TCONS_00234854 |
zinc finger and BTB domain containing 10 |
novel protein coding |
TCONS_00218273 |
651 |
263 |
UTR3 |
Trans |
|
|
TCONS_00235205 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00218273 |
639 |
257 |
UTR3 |
Trans |
|
|
TCONS_00235219 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00218273 |
639 |
257 |
UTR3 |
Trans |
|
|
TCONS_00235231 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00218273 |
639 |
257 |
UTR3 |
Trans |
|
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
TCONS_00218273 |
644 |
297 |
UTR5 |
Trans |
|
|
TCONS_00235708 |
oxidation resistance 1 |
novel protein coding |
TCONS_00218273 |
724 |
271 |
UTR3 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
TCONS_00218273 |
644 |
295 |
UTR3 |
Trans |
|
|
TCONS_00247058 |
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
novel protein coding |
TCONS_00218273 |
710 |
274 |
UTR3 |
Trans |
|
|
TCONS_00247576 |
contactin associated protein-like 3 |
novel protein coding |
TCONS_00218273 |
640 |
260 |
UTR3 |
Trans |
|
|
TCONS_00247594 |
contactin associated protein-like 3 |
novel protein coding |
TCONS_00218273 |
640 |
260 |
UTR3 |
Trans |
|
|
TCONS_00247617 |
unprocessed_pseudogene |
novel protein coding |
TCONS_00218273 |
604 |
287 |
UTR5 |
Trans |