Detailed information on TCONS_00224395

lncRNA-RNA interactions

Number of interactions: 254

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000232564 guanine nucleotide binding protein (G protein), beta polypeptide 4 protein coding TCONS_00224395 609 275 UTR3 Trans
ENST00000257696 hypoxia inducible lipid droplet-associated protein coding TCONS_00224395 620 295 UTR3 Trans
ENST00000323699 delta(4)-desaturase, sphingolipid 1 protein coding TCONS_00224395 605 290 UTR3 Trans
ENST00000330676 TLC domain containing 2 protein coding TCONS_00224395 681 278 UTR3 Trans
ENST00000330676 TLC domain containing 2 protein coding TCONS_00224395 615 278 UTR3 Trans
ENST00000334197 zinc finger protein 347 protein coding TCONS_00224395 650 285 UTR3 Trans
ENST00000338758 parvin, beta protein coding TCONS_00224395 647 295 UTR3 Trans
ENST00000339732 polypeptide N-acetylgalactosaminyltransferase 15 protein coding TCONS_00224395 608 284 UTR3 Trans
ENST00000339732 polypeptide N-acetylgalactosaminyltransferase 15 protein coding TCONS_00224395 668 294 UTR3 Trans
ENST00000345714 serum/glucocorticoid regulated kinase family, member 3 protein coding TCONS_00224395 719 282 UTR3 Trans
ENST00000353047 cathepsin B protein coding TCONS_00224395 624 283 UTR3 Trans
ENST00000358157 sphingosine-1-phosphate receptor 3 protein coding TCONS_00224395 605 285 UTR3 Trans
ENST00000358157 sphingosine-1-phosphate receptor 3 protein coding TCONS_00224395 605 285 UTR3 Trans
ENST00000367590 xenotropic and polytropic retrovirus receptor 1 protein coding TCONS_00224395 529 292 UTR3 Trans
ENST00000375846 sphingosine-1-phosphate receptor 3 protein coding TCONS_00224395 605 285 UTR3 Trans
ENST00000375846 sphingosine-1-phosphate receptor 3 protein coding TCONS_00224395 605 285 UTR3 Trans
ENST00000377411 G protein-coupled receptor 157 protein coding TCONS_00224395 621 293 UTR3 Trans
ENST00000378004 Rho GTPase activating protein 26 protein coding TCONS_00224395 570 296 UTR3 Trans
ENST00000382142 myotubularin related protein 12 protein coding TCONS_00224395 600 285 UTR3 Trans
ENST00000389534 zinc finger protein 841 protein coding TCONS_00224395 613 275 UTR3 Trans
ENST00000391877 delta(4)-desaturase, sphingolipid 1 protein coding TCONS_00224395 605 290 UTR3 Trans
ENST00000407780 inducible T-cell co-stimulator ligand protein coding TCONS_00224395 1055 593 UTR3 Trans
ENST00000409359 Rho guanine nucleotide exchange factor (GEF) 4 protein coding TCONS_00224395 864 418 UTR3 Trans
ENST00000409359 Rho guanine nucleotide exchange factor (GEF) 4 protein coding TCONS_00224395 587 283 UTR3 Trans
ENST00000410023 interleukin 1 receptor, type I protein coding TCONS_00224395 604 290 UTR3 Trans
ENST00000422247 centrosomal protein 135kDa protein coding TCONS_00224395 628 281 UTR3 Trans
ENST00000426391 zinc finger protein 841 protein coding TCONS_00224395 613 275 UTR3 Trans
ENST00000432564 hydroxycarboxylic acid receptor 1 protein coding TCONS_00224395 615 284 UTR3 Trans
ENST00000435296 hypoxia inducible lipid droplet-associated protein coding TCONS_00224395 620 295 UTR3 Trans
ENST00000439138 transmembrane protein 98 protein coding TCONS_00224395 591 309 UTR5 Trans
ENST00000439138 transmembrane protein 98 protein coding TCONS_00224395 567 287 UTR5 Trans
ENST00000478730 ORAI calcium release-activated calcium modulator 2 protein coding TCONS_00224395 572 307 UTR3 Trans
ENST00000478730 ORAI calcium release-activated calcium modulator 2 protein coding TCONS_00224395 669 544 UTR3 Trans
ENST00000478730 ORAI calcium release-activated calcium modulator 2 protein coding TCONS_00224395 616 268 UTR3 Trans
ENST00000478730 ORAI calcium release-activated calcium modulator 2 protein coding TCONS_00224395 611 278 UTR3 Trans
ENST00000478730 ORAI calcium release-activated calcium modulator 2 protein coding TCONS_00224395 668 293 UTR3 Trans
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript TCONS_00224395 681 283 noncoding Trans
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript TCONS_00224395 577 283 noncoding Trans
ENST00000498813 delta(4)-desaturase, sphingolipid 1 processed transcript TCONS_00224395 597 288 noncoding Trans
ENST00000513143 podoplanin protein coding TCONS_00224395 613 296 UTR5 Trans
ENST00000552918 spermatogenesis associated, serine-rich 2 protein coding TCONS_00224395 657 282 UTR3 Trans
ENST00000553127 spermatogenesis associated, serine-rich 2 protein coding TCONS_00224395 667 295 UTR3 Trans
ENST00000560870 sense_intronic sense intronic TCONS_00224395 553 270 noncoding Trans
ENST00000592474 phosphoribosyl pyrophosphate synthetase-associated protein 1 retained intron TCONS_00224395 672 285 noncoding Trans
ENST00000592474 phosphoribosyl pyrophosphate synthetase-associated protein 1 retained intron TCONS_00224395 606 286 noncoding Trans
ENST00000594295 zinc finger protein 841 protein coding TCONS_00224395 613 275 UTR3 Trans
ENST00000617275 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 protein coding TCONS_00224395 622 284 UTR3 Trans
ENST00000620340 ribosomal protein S6 kinase, 90kDa, polypeptide 6 protein coding TCONS_00224395 653 284 UTR3 Trans
ENST00000621141 G protein-coupled receptor 1 protein coding TCONS_00224395 678 288 UTR3 Trans
TCONS_00002817 lincRNA novel protein coding TCONS_00224395 615 297 UTR3 Trans
TCONS_00006772 lincRNA novel protein coding TCONS_00224395 620 285 UTR3 Trans
TCONS_00009095 xenotropic and polytropic retrovirus receptor 1 novel protein coding TCONS_00224395 529 292 UTR3 Trans
TCONS_00009834 SRY (sex determining region Y)-box 13 novel protein coding TCONS_00224395 600 284 UTR3 Trans
TCONS_00009834 SRY (sex determining region Y)-box 13 novel protein coding TCONS_00224395 674 294 UTR3 Trans
TCONS_00010077 Ras association (RalGDS/AF-6) domain family member 5 novel protein coding TCONS_00224395 550 285 UTR3 Trans
TCONS_00010841 epoxide hydrolase 1, microsomal (xenobiotic) novel protein coding TCONS_00224395 564 301 UTR3 Trans
TCONS_00011236 solute carrier family 35, member F3 novel protein coding TCONS_00224395 649 286 UTR3 Trans
TCONS_00012674 G protein-coupled receptor 157 novel protein coding TCONS_00224395 621 293 UTR3 Trans
TCONS_00020768 processed_transcript novel protein coding TCONS_00224395 617 299 UTR5 Trans
TCONS_00021902 protein tyrosine phosphatase, non-receptor type 14 novel protein coding TCONS_00224395 701 284 UTR3 Trans
TCONS_00021903 protein tyrosine phosphatase, non-receptor type 14 novel protein coding TCONS_00224395 701 284 UTR3 Trans
TCONS_00023682 pre-mRNA processing factor 18 novel protein coding TCONS_00224395 615 281 UTR3 Trans
TCONS_00023685 pre-mRNA processing factor 18 novel protein coding TCONS_00224395 615 281 UTR3 Trans
TCONS_00023687 pre-mRNA processing factor 18 novel protein coding TCONS_00224395 615 281 UTR3 Trans
TCONS_00023689 pre-mRNA processing factor 18 novel protein coding TCONS_00224395 615 281 UTR3 Trans
TCONS_00025760 zinc finger, MIZ-type containing 1 novel protein coding TCONS_00224395 616 302 UTR5 Trans
TCONS_00025761 zinc finger, MIZ-type containing 1 novel protein coding TCONS_00224395 616 302 UTR5 Trans
TCONS_00025775 zinc finger, MIZ-type containing 1 novel protein coding TCONS_00224395 616 302 UTR5 Trans
TCONS_00028040 ankyrin repeat domain 16 novel protein coding TCONS_00224395 656 299 UTR3 Trans
TCONS_00028040 ankyrin repeat domain 16 novel protein coding TCONS_00224395 788 458 UTR3 Trans
TCONS_00030588 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 633 283 UTR3 Trans
TCONS_00030588 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 742 458 UTR3 Trans
TCONS_00030588 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 662 290 UTR3 Trans
TCONS_00030588 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 614 296 UTR3 Trans
TCONS_00030591 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 644 298 UTR3 Trans
TCONS_00030591 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 614 285 UTR3 Trans
TCONS_00030591 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 633 285 UTR3 Trans
TCONS_00030591 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 654 296 UTR3 Trans
TCONS_00030592 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 614 285 UTR3 Trans
TCONS_00030592 cytoplasmic polyadenylation element binding protein 3 novel protein coding TCONS_00224395 644 298 UTR3 Trans
TCONS_00033132 dynein heavy chain domain 1 novel protein coding TCONS_00224395 606 302 UTR5 Trans
TCONS_00038233 protease, serine, 23 novel protein coding TCONS_00224395 610 289 UTR3 Trans
TCONS_00039782 GRAM domain containing 1B novel protein coding TCONS_00224395 634 294 UTR5 Trans
TCONS_00043422 vacuolar protein sorting 37 homolog C (S. cerevisiae) novel protein coding TCONS_00224395 717 289 UTR5 Trans
TCONS_00050192 FYVE, RhoGEF and PH domain containing 4 novel protein coding TCONS_00224395 702 284 UTR5 Trans
TCONS_00050209 FYVE, RhoGEF and PH domain containing 4 novel protein coding TCONS_00224395 702 284 UTR5 Trans
TCONS_00050741 spermatogenesis associated, serine-rich 2 novel protein coding TCONS_00224395 667 295 UTR3 Trans
TCONS_00053503 anoctamin 4 novel protein coding TCONS_00224395 624 295 UTR3 Trans
TCONS_00053513 anoctamin 4 novel protein coding TCONS_00224395 624 295 UTR5 Trans
TCONS_00054795 B-cell CLL/lymphoma 7A novel protein coding TCONS_00224395 679 408 UTR3 Trans
TCONS_00057601 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 657 292 UTR3 Trans
TCONS_00058750 lincRNA novel protein coding TCONS_00224395 675 285 UTR3 Trans
TCONS_00065094 UBA domain containing 2 novel protein coding TCONS_00224395 690 284 UTR5 Trans
TCONS_00065097 UBA domain containing 2 novel protein coding TCONS_00224395 690 284 UTR3 Trans
TCONS_00065103 UBA domain containing 2 novel protein coding TCONS_00224395 658 286 UTR5 Trans
TCONS_00065103 UBA domain containing 2 novel protein coding TCONS_00224395 690 284 UTR5 Trans
TCONS_00065859 ubiquitin specific peptidase 12 novel protein coding TCONS_00224395 721 284 UTR3 Trans
TCONS_00065864 long intergenic non-protein coding RNA 412 novel protein coding TCONS_00224395 699 282 UTR3 Trans
TCONS_00075827 forkhead box N3 novel protein coding TCONS_00224395 602 280 UTR3 Trans
TCONS_00075917 ribosomal protein S6 kinase, 90kDa, polypeptide 5 novel noncoding TCONS_00224395 607 251 noncoding Trans
TCONS_00075917 ribosomal protein S6 kinase, 90kDa, polypeptide 5 novel noncoding TCONS_00224395 640 260 noncoding Trans
TCONS_00088780 synaptotagmin XVII novel protein coding TCONS_00224395 680 286 UTR3 Trans
TCONS_00095053 epithelial membrane protein 2 novel protein coding TCONS_00224395 636 296 UTR3 Trans
TCONS_00098643 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 638 285 UTR5 Trans
TCONS_00098643 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 687 290 UTR5 Trans
TCONS_00098644 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 638 285 UTR3 Trans
TCONS_00098644 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 687 290 UTR3 Trans
TCONS_00098645 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 638 285 UTR3 Trans
TCONS_00098645 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 687 290 UTR3 Trans
TCONS_00098647 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 638 285 UTR3 Trans
TCONS_00098647 fatty acid 2-hydroxylase novel protein coding TCONS_00224395 687 290 UTR3 Trans
TCONS_00099311 solute carrier family 7 (amino acid transporter light chain, L system), member 5 novel protein coding TCONS_00224395 623 286 UTR5 Trans
TCONS_00099312 solute carrier family 7 (amino acid transporter light chain, L system), member 5 novel protein coding TCONS_00224395 623 286 UTR5 Trans
TCONS_00101169 myosin phosphatase Rho interacting protein novel protein coding TCONS_00224395 571 287 UTR3 Trans
TCONS_00104867 hepatic leukemia factor novel protein coding TCONS_00224395 643 288 UTR3 Trans
TCONS_00104867 hepatic leukemia factor novel protein coding TCONS_00224395 603 295 UTR3 Trans
TCONS_00104871 hepatic leukemia factor novel protein coding TCONS_00224395 643 288 UTR3 Trans
TCONS_00104871 hepatic leukemia factor novel protein coding TCONS_00224395 603 295 UTR3 Trans
TCONS_00105791 arylsulfatase G novel protein coding TCONS_00224395 626 286 UTR3 Trans
TCONS_00107851 transient receptor potential cation channel, subfamily V, member 1 novel protein coding TCONS_00224395 611 296 UTR5 Trans
TCONS_00107851 transient receptor potential cation channel, subfamily V, member 1 novel protein coding TCONS_00224395 606 287 UTR5 Trans
TCONS_00107864 transient receptor potential cation channel, subfamily V, member 1 novel protein coding TCONS_00224395 606 287 UTR3 Trans
TCONS_00109814 lincRNA novel protein coding TCONS_00224395 568 290 UTR3 Trans
TCONS_00116334 low density lipoprotein receptor class A domain containing 4 novel protein coding TCONS_00224395 621 251 UTR3 Trans
TCONS_00116668 desmoglein 3 novel protein coding TCONS_00224395 636 286 UTR3 Trans
TCONS_00116668 desmoglein 3 novel protein coding TCONS_00224395 670 295 UTR3 Trans
TCONS_00116668 desmoglein 3 novel protein coding TCONS_00224395 555 271 UTR3 Trans
TCONS_00117136 CBP80/20-dependent translation initiation factor novel protein coding TCONS_00224395 565 300 UTR3 Trans
TCONS_00117136 CBP80/20-dependent translation initiation factor novel protein coding TCONS_00224395 606 283 UTR5 Trans
TCONS_00118582 centrosomal protein 76kDa novel protein coding TCONS_00224395 606 306 UTR3 Trans
TCONS_00119477 zinc finger and BTB domain containing 7C novel protein coding TCONS_00224395 618 283 UTR5 Trans
TCONS_00119478 zinc finger and BTB domain containing 7C novel protein coding TCONS_00224395 607 285 UTR5 Trans
TCONS_00119478 zinc finger and BTB domain containing 7C novel protein coding TCONS_00224395 643 295 UTR5 Trans
TCONS_00119961 ring finger protein 152 novel protein coding TCONS_00224395 613 285 UTR5 Trans
TCONS_00124891 zinc finger protein 540 novel protein coding TCONS_00224395 609 266 UTR5 Trans
TCONS_00124891 zinc finger protein 540 novel protein coding TCONS_00224395 630 278 UTR5 Trans
TCONS_00132247 zinc finger protein 43 novel noncoding TCONS_00224395 606 287 noncoding Trans
TCONS_00133831 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) novel protein coding TCONS_00224395 665 456 UTR3 Trans
TCONS_00135631 zinc finger protein 841 novel protein coding TCONS_00224395 613 275 UTR3 Trans
TCONS_00135631 zinc finger protein 841 novel protein coding TCONS_00224395 681 285 UTR3 Trans
TCONS_00135644 zinc finger protein 841 novel protein coding TCONS_00224395 613 275 UTR3 Trans
TCONS_00135884 zinc finger protein 347 novel protein coding TCONS_00224395 650 285 UTR3 Trans
TCONS_00137691 FOS-like antigen 2 novel protein coding TCONS_00224395 608 285 UTR5 Trans
TCONS_00137691 FOS-like antigen 2 novel protein coding TCONS_00224395 613 297 UTR5 Trans
TCONS_00140732 NCK adaptor protein 2 novel protein coding TCONS_00224395 610 285 UTR3 Trans
TCONS_00140732 NCK adaptor protein 2 novel protein coding TCONS_00224395 650 295 UTR3 Trans
TCONS_00141667 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 641 295 UTR3 Trans
TCONS_00141667 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 623 277 UTR3 Trans
TCONS_00141667 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 660 286 UTR3 Trans
TCONS_00141679 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 641 295 UTR3 Trans
TCONS_00141679 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 623 277 UTR3 Trans
TCONS_00141679 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding TCONS_00224395 660 286 UTR3 Trans
TCONS_00142157 LY6/PLAUR domain containing 6B novel noncoding TCONS_00224395 646 301 noncoding Trans
TCONS_00142168 LY6/PLAUR domain containing 6B novel protein coding TCONS_00224395 646 301 UTR3 Trans
TCONS_00142174 LY6/PLAUR domain containing 6B novel protein coding TCONS_00224395 646 301 UTR3 Trans
TCONS_00147093 ATPase family, AAA domain containing 2B novel protein coding TCONS_00224395 616 286 UTR3 Trans
TCONS_00147093 ATPase family, AAA domain containing 2B novel protein coding TCONS_00224395 653 294 UTR3 Trans
TCONS_00147113 ATPase family, AAA domain containing 2B novel protein coding TCONS_00224395 653 294 UTR5 Trans
TCONS_00148048 potassium voltage-gated channel, subfamily G, member 3 novel protein coding TCONS_00224395 923 600 UTR3 Trans
TCONS_00148387 reticulon 4 novel protein coding TCONS_00224395 690 286 UTR3 Trans
TCONS_00148389 reticulon 4 novel protein coding TCONS_00224395 690 286 UTR3 Trans
TCONS_00148450 coiled-coil domain containing 88A novel protein coding TCONS_00224395 677 289 UTR3 Trans
TCONS_00148450 coiled-coil domain containing 88A novel protein coding TCONS_00224395 642 298 UTR3 Trans
TCONS_00149280 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} novel protein coding TCONS_00224395 613 285 UTR3 Trans
TCONS_00150696 septin 10 novel protein coding TCONS_00224395 608 289 UTR3 Trans
TCONS_00150696 septin 10 novel protein coding TCONS_00224395 644 295 UTR3 Trans
TCONS_00157701 VAMP (vesicle-associated membrane protein)-associated protein B and C novel protein coding TCONS_00224395 642 284 UTR5 Trans
TCONS_00159951 zinc fingers and homeoboxes 3 novel protein coding TCONS_00224395 636 295 UTR3 Trans
TCONS_00159952 zinc fingers and homeoboxes 3 novel protein coding TCONS_00224395 636 295 UTR3 Trans
TCONS_00161482 BTB and CNC homology 1, basic leucine zipper transcription factor 1 novel protein coding TCONS_00224395 618 287 UTR3 Trans
TCONS_00163367 runt-related transcription factor 1 novel protein coding TCONS_00224395 622 282 UTR3 Trans
TCONS_00163485 holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) novel protein coding TCONS_00224395 605 278 UTR3 Trans
TCONS_00163488 holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) novel protein coding TCONS_00224395 605 278 UTR3 Trans
TCONS_00163891 inducible T-cell co-stimulator ligand novel protein coding TCONS_00224395 1055 593 UTR3 Trans
TCONS_00165341 TTC28 antisense RNA 1 novel protein coding TCONS_00224395 619 296 UTR5 Trans
TCONS_00171146 F-box and leucine-rich repeat protein 2 novel noncoding TCONS_00224395 651 285 noncoding Trans
TCONS_00171146 F-box and leucine-rich repeat protein 2 novel noncoding TCONS_00224395 618 300 noncoding Trans
TCONS_00175724 TSC22 domain family, member 2 novel protein coding TCONS_00224395 650 284 UTR3 Trans
TCONS_00182613 processed_transcript novel protein coding TCONS_00224395 678 282 UTR5 Trans
TCONS_00182614 processed_transcript novel protein coding TCONS_00224395 678 282 UTR5 Trans
TCONS_00184373 neutral cholesterol ester hydrolase 1 novel protein coding TCONS_00224395 603 285 UTR3 Trans
TCONS_00184373 neutral cholesterol ester hydrolase 1 novel protein coding TCONS_00224395 649 295 UTR3 Trans
TCONS_00184373 neutral cholesterol ester hydrolase 1 novel protein coding TCONS_00224395 601 295 UTR3 Trans
TCONS_00184486 guanine nucleotide binding protein (G protein), beta polypeptide 4 novel protein coding TCONS_00224395 609 275 UTR3 Trans
TCONS_00185516 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 640 284 UTR5 Trans
TCONS_00185519 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 640 284 UTR3 Trans
TCONS_00186316 KIAA0232 novel protein coding TCONS_00224395 607 284 UTR5 Trans
TCONS_00187165 NEDD4 binding protein 2 novel protein coding TCONS_00224395 686 285 UTR3 Trans
TCONS_00189321 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 666 284 UTR5 Trans
TCONS_00189329 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 666 284 UTR5 Trans
TCONS_00189333 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 666 284 UTR5 Trans
TCONS_00189336 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 666 284 UTR5 Trans
TCONS_00189341 transcribed_unprocessed_pseudogene novel protein coding TCONS_00224395 666 284 UTR5 Trans
TCONS_00190999 zinc finger protein 721 novel protein coding TCONS_00224395 601 284 UTR5 Trans
TCONS_00190999 zinc finger protein 721 novel protein coding TCONS_00224395 680 307 UTR5 Trans
TCONS_00191796 G protein-coupled receptor 125 novel protein coding TCONS_00224395 624 295 UTR5 Trans
TCONS_00191797 G protein-coupled receptor 125 novel protein coding TCONS_00224395 624 295 UTR3 Trans
TCONS_00192322 tec protein tyrosine kinase novel protein coding TCONS_00224395 612 300 UTR5 Trans
TCONS_00192331 tec protein tyrosine kinase novel protein coding TCONS_00224395 612 300 UTR3 Trans
TCONS_00194652 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 656 284 UTR5 Trans
TCONS_00194652 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 642 286 UTR5 Trans
TCONS_00194655 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 656 284 UTR5 Trans
TCONS_00194655 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 642 286 UTR5 Trans
TCONS_00194655 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 654 287 UTR3 Trans
TCONS_00194686 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 721 286 UTR3 Trans
TCONS_00194686 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 643 286 UTR5 Trans
TCONS_00194686 E74-like factor 2 (ets domain transcription factor) novel protein coding TCONS_00224395 609 285 UTR5 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding TCONS_00224395 505 263 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding TCONS_00224395 571 285 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding TCONS_00224395 592 286 UTR3 Trans
TCONS_00202516 family with sequence similarity 173, member B novel protein coding TCONS_00224395 650 294 UTR3 Trans
TCONS_00202828 myotubularin related protein 12 novel protein coding TCONS_00224395 600 285 UTR3 Trans
TCONS_00203984 family with sequence similarity 169, member A novel protein coding TCONS_00224395 646 280 UTR5 Trans
TCONS_00203984 family with sequence similarity 169, member A novel protein coding TCONS_00224395 619 289 UTR5 Trans
TCONS_00203985 family with sequence similarity 169, member A novel protein coding TCONS_00224395 628 277 UTR5 Trans
TCONS_00203985 family with sequence similarity 169, member A novel protein coding TCONS_00224395 683 285 UTR5 Trans
TCONS_00203985 family with sequence similarity 169, member A novel protein coding TCONS_00224395 646 280 UTR5 Trans
TCONS_00203985 family with sequence similarity 169, member A novel protein coding TCONS_00224395 619 289 UTR5 Trans
TCONS_00203988 family with sequence similarity 169, member A novel noncoding TCONS_00224395 683 285 noncoding Trans
TCONS_00203989 family with sequence similarity 169, member A novel protein coding TCONS_00224395 628 277 UTR5 Trans
TCONS_00210637 polymerase (DNA directed), eta novel protein coding TCONS_00224395 538 270 UTR3 Trans
TCONS_00211226 antisense novel protein coding TCONS_00224395 602 295 UTR5 Trans
TCONS_00213182 tubby like protein 4 novel protein coding TCONS_00224395 601 279 UTR3 Trans
TCONS_00213191 tubby like protein 4 novel protein coding TCONS_00224395 615 298 UTR5 Trans
TCONS_00222403 protein tyrosine phosphatase, non-receptor type 12 novel protein coding TCONS_00224395 654 295 UTR5 Trans
TCONS_00230811 kielin/chordin-like protein novel protein coding TCONS_00224395 626 289 UTR3 Trans
TCONS_00233718 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 novel protein coding TCONS_00224395 636 293 UTR5 Trans
TCONS_00233718 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 novel protein coding TCONS_00224395 622 284 UTR3 Trans
TCONS_00235205 epithelial splicing regulatory protein 1 novel protein coding TCONS_00224395 627 321 UTR3 Trans
TCONS_00235205 epithelial splicing regulatory protein 1 novel protein coding TCONS_00224395 614 299 UTR3 Trans
TCONS_00235219 epithelial splicing regulatory protein 1 novel protein coding TCONS_00224395 614 299 UTR3 Trans
TCONS_00235231 epithelial splicing regulatory protein 1 novel protein coding TCONS_00224395 627 321 UTR5 Trans
TCONS_00235231 epithelial splicing regulatory protein 1 novel protein coding TCONS_00224395 614 299 UTR3 Trans
TCONS_00235393 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) novel protein coding TCONS_00224395 619 295 UTR5 Trans
TCONS_00237101 cathepsin B novel protein coding TCONS_00224395 624 283 UTR3 Trans
TCONS_00237103 cathepsin B novel protein coding TCONS_00224395 624 283 UTR3 Trans
TCONS_00240045 zinc finger protein 706 novel protein coding TCONS_00224395 617 276 UTR3 Trans
TCONS_00240046 zinc finger protein 706 novel protein coding TCONS_00224395 617 276 UTR5 Trans
TCONS_00240688 metastasis suppressor 1 novel protein coding TCONS_00224395 609 286 UTR3 Trans
TCONS_00240688 metastasis suppressor 1 novel protein coding TCONS_00224395 692 295 UTR3 Trans
TCONS_00240832 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 novel protein coding TCONS_00224395 678 282 UTR3 Trans
TCONS_00243477 osteoclast stimulating factor 1 novel protein coding TCONS_00224395 639 285 UTR5 Trans
TCONS_00243482 osteoclast stimulating factor 1 novel protein coding TCONS_00224395 639 285 UTR5 Trans
TCONS_00244030 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 640 285 UTR3 Trans
TCONS_00244030 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 694 597 UTR3 Trans
TCONS_00244033 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 640 285 UTR5 Trans
TCONS_00244038 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 640 285 UTR5 Trans
TCONS_00244038 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 694 597 UTR3 Trans
TCONS_00244055 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 640 285 UTR3 Trans
TCONS_00244055 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 694 597 UTR3 Trans
TCONS_00244067 WNK lysine deficient protein kinase 2 novel protein coding TCONS_00224395 640 285 UTR5 Trans
TCONS_00244326 transforming growth factor, beta receptor 1 novel protein coding TCONS_00224395 613 272 UTR5 Trans
TCONS_00247058 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 novel protein coding TCONS_00224395 666 288 UTR3 Trans
TCONS_00249090 transmembrane protein 245 novel protein coding TCONS_00224395 605 274 UTR3 Trans

Sequence

>TCONS_00249090 (5498 nt)
GCGTTACGGAAAGTGAAGTGTTTCCGGCTCCGGTGTCATGGCCGGCTCCTACCCTGAAGGTGCACCTGCAATCCTCGCCGATAAGAGGCAGCAGTTCGGA
AGCCGGTTCCTGAGCGATCCGGCGCGCGTCTTCCACCACAATGCCTGGTAATCACCCTGCCCCCTCGCCCGGCCTGTCGCTGGCCGTCTGTCCCGCCGCC
TCGGAGCATTCCGAAAAGCCCCTGACCGCCGGCCACGAGTCAAGCTGCCCTACCCGAGGCACTCTCCAAGGGGAGAGAAACTCCTAGGCCAGCGACTCAC
CCTGCTCGCAGCCAGGACGTGAAGCCCCTAAGCTGCCCGTTTGATTTTCTCAGGGACAATGTGGAGTGGTCGGAAGAGCAAGCCGCGGCGGCGGAGAGAA
AAGTCCAGGAGAACAGTATCCAGCGGGTGTGCCAGGAGAAACAAGTTGATTATGAGATCAATGCCCACAAATACTGGAATGACTTCTACAAAATCCACGA
AAATGGGTTTTTCAAGGATAGACATTGGCTTTTTACCGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATTTGAAGGATTGGTTCTTGGAGAAC
AAGAGTGAAGTATGTGAATGTAGAAACAATGAGGATGGACCTGGTTTAATAATGGAAGAACAGCACAAGTGTTCTTCGAAGAGCCTTGAACATAAAACAC
AGACACCTCCTGTGGAGGAGAATGTAACTCAGAAAATTAGTGACCTGGAAATTTGTGCTGATGAGTTTCCTGGATCCTCAGCCACCTACCGAATACTGGA
GGTAACCTTTTATTGTCTTGGTAGTGGGATATGTGAAGCTATTATATTTGTGCACATGAGGTAGCATAGAGAGGCTGACAATAAAAGTAACTTCTATTGG
ATGATGCTGACTAGACTTGACCCTTATATTAGCCTGGAATCACCTCCATTTTTGAACTGATAAAATGCCCTCAGTGCAGACCAGATATCTGGTGGTCATC
ACAGACAAAGATCACACGGGAATAGCATGTCACTTCCAAAAATTGTATTAATAGCATCATGCTGTACCTGTCACATGACACTGTATCATACAGGTGAAAG
AGCTCAACATGATCATGCTATAACTCTGGAAAAATGTCCCAGATCAGAAGAAATTGTTGCTTCTCTTCTAATACAGTTACAGGAATGGAGAGGGTAGTTA
GGATGGTGCCTGTTTCTTAGGCCTGGGATAATTCTCTTCCTCTGCATTTGGATGGTGTTGCAGAGTCTAGACCTGGAAAAATGTCTAGATTGGTATAATG
TAAATTCATAAATGGGGACTGCGCACGTTACTGGAAGCTGGTTCTGGAACTGGTTAGCCTTGGGATTGAGTCCTATGGTGTGATCTTAGACAATTTCCTT
ACCCTCTCTGAGCAGTGAGACTGCTGCCTCTGCACCTTATACTTATGAGGATGGAGATAATGTATGTAAAAGGGCTAAGAACAGTATCTGGCACATTGTT
AAGCCCTTAATAAATAGTTGCTGTCTTCATTACCACGCAGCACTGTGTTTAGGACAAGGTTGTCAAGGTCCCCTTTTCATACATTTTTCAGCACAGTCTA
TTACAAATATTTTCACAATAATAATATAAGCTTAGTAAGAAAATACTTCATCTACAGGACAATTTGCTAGAACTCAAAAGATAAAAGCAATCCTTGCCCT
TTTTTCTAGACCACCTCGTTTCTGCTAATAAAAACCCATGTTCTTGTCTTTTAAGGGTTCCTGAAGTCAACATCAAAATCAACAAATGTCATGGGTACTG
TTTAGCTCTGGTCACTACACCTTCCCTAATACAGTTAGGCCAGATTCTTGTTGATTATTATTTTTCTAGCTTTTCTAGCTTTCGGGAATTAACTCTGGAA
AGTTCTGTGATTAATAGTTCATTTCTGTCTGCAGGTTGGCTGTGGTGTGGGAAACACAGTCTTTCCAATTTTACAAACGAACAAGTAAGTATGTTGTAAA
AGTTTATGATAGCAAAGAAGATAAAAGTGAAGGTTGGCTGGGCGCATTGCTTCACGACAGTAATCCCAGCACTTTGGGAGGCCAAAGCAGGATTGCTTGA
GGCCAGGAGTGTGAGACCAGCCAGGGCAATGTAGCAAGAAAAAAAAGTAAAGATTTTTTCAAAACTTGCTGCATCAAACTATCAATAATGGTTATTGGAA
AATATGGATTATGTCAGATTCAGATTTCTACATTGTTCATTTATGGATTGTTTTAATTTGATTATCTTTATCATTTGGAAAATTAGACTTAAAACTTGCT
AGTGTTAACGTTTAGTGCCTTCTTCTTCTTCTAAGGAACAAATGTGTTCAACTTTTCCATTCTCATGATCTCTGAAGAACAGTCAGTGGCTGAGTTGTCA
TTACCCCCATGGTAGAGTTGAGAAAGCTATCATACATGAAGATGTCTCCTGTTCTGATGAAAACACACTGGTTTTGTGTACTTAAGCAGAACGCTTCTGA
CACCAAATGTGCAGGGTTTTTGCCAACACTGACCAATTCAACAACAGCTGGGTGTCCTACAATTCAATTCTGACACTGTCTACTTGGAGTTGGTATCAGA
TCCCACAAGTTAAGGGTTCGGTCCCAGAAGACTGCCCCCCACTTCAGATGCCAGTTGTGAATCTGGCCCTCCGTGTTTCTGCCCTACAGGCTGTAAATCA
GGGGAGCCCTGTCTCCAGTTCAATAATTTCCTAGAATGGCTCACAGAACTCAGGGAAACACTTTACTTACATTTATGTGTTTGTTATGAAGGATACAGAT
TAACAGCCAGCTGAAGAAGTAATTAGAGTGGGGTTCAGAGGATCTCACGCTCAGGAGCTTTGACCCTGAGGAGCTCAGTGCAGTGTTCTCCTAGCACACG
GATGTGTTCACCAACCTGGAAGCTCATCAAGGGTTTTTTTTTAGTTTTGAGACAAGCTCTTGTTCTGTCATCCCGACTAGAGCACAGTGGTGTGCCCATA
GCACACTGCAGGCTCAAACTCCTAGGCTCAAGCAATCGTCTCACCTCAGCCTCCCAAGTAGCTGGGACTACAGACACATGCCACCATACCCAGCTAATTT
TTGTTTATTTTTTGTAGAGACAGGGTCTCACTTTGTTTCCCAGACTGGTCTCAAACTCCTGGCTCAAGTGATCCTCTTGCCTCGGCCTCCCAAAGTGCTG
GAATTACATGCATAAGTCACCGTTCCCAGCCTCAAGAGTTTTTATACAGCTAGGACACAGACTTATGGGAAAATTAATTTTAAAAGGAGAAGAAGAAAAT
AGTTTTCATACAACATAATCTGCATTTCTATTCAGGACATTGGTGGGTGAAGCTGAAAGTTCCAATCAGTTTGCCCTTACTAGTGTTGGCCCCACCCCAG
GTCATCTCATTAACATAAATTCAGTGTGGTCCTGAGGGAGTTCATCATGAATAACAAAAGATACAGAGTCTTGCTTCATCTCCCAGGTTGGAGTACAGTG
GCACAATCTCGACTCATTGCAACCTCCGCCTTCCGGGTTCAAGTGATTCACCTGCCTCAGCCTCCCTAGTAGCTGGGATTAAGGGTGCATGCCACCACAC
ACAACTAATTTTTATATTTTTAGTAGAGACAGGGTTTCACCACATTGGCCAGGCTGGTCTCAGACTCCTGACCTCAGGTGATCTACCTGCCTCGGCCTCC
CAAAGTGCTGGGATTATATGTGTGAGCCGCCGCGCCCAGCCTGCTGAGGAAATTCTTAAGGTTTTTGGAACTCTGTGCCTGGAACCACAAAGACCAACAC
CAAATATATTTATTATACCATACCTGTTTTGTTTTGTTTGAGACGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTAATCTTGGCTCACTGC
AACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAATACCCGGGATTACAGGCATGCGCCACAATGCCCAGCTAATTTTTGTATTTT
TAGTAGAGATGGGGTTTCGCCGTGTCGGCTAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGG
CGTGAGCCATGGCTCCTGGCCCTATAGCTGTTTTTAAACCCCTTGTGGAAATGACATTCCAGTTCTGTATTCATTACTGGAATCCACTGTTTCTCAAAGG
TTTCATATAATATATACTTTGCCAATTTAGCCCACAGTATTCATTAACAGGATTAAGTAAAACATTAGCCTCATTACTAATATACATTTAAATATTTCTA
CAATTTGTTCTCAGAAATTTCTAAGAAAATGGCAAGTCCTAGTACTAACACTGAAGAAAAGAGATTGTTCTACTCTTGAAGTTACAGTCTGAGGAACCCA
CCTCAAATGGGAGATTGACTTAGCTTCAAGTTATGGCCATTAATCATCAATATCATCAATGAATGTAAAACTGAATGTAGATGGCATCTTTGCCACAGCC
TCTTTATGCCATTTAAATAAGATCGCTGTGTTCAGTATCTTACTAGAACCCACTTGTTCATGTAATTCACTGGCTTAGAATTGGCATGTTTTCTACTGCC
TGTGAATCAGGTTTAAATTGTTGGGCATAGTTTTCAAAGTCCTCTACAAGAGTGTGCCCTATAAAGTATGTCCTCTTATCCCTCAGTGCACTGGTCACAC
CTTGCATGTCTTCCCCTGACTCCGTACCTTTCCAAAATGTCCTTTGTTTCTACTACTCTATTTCCTTCCTTCCTCACATTCAGATCAGAAGCATCTAGAA
AACTTCCCTAGTTGTTATCGTCCAGCTGCCTCACTCTGCAGTCTTTTTCGAGACAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGATTCGATCTCGG
CTAGCCGCAACCTCCGCCTCCCAGGTTCAAGCAATTATCCTGCCTCAGCCTCCCGAGTAGTTGGGATTACAGGTGCCCACCACCACGCCCAGCTAATTTT
TGTATTATTGATTGATTGATTGGTTGATTGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACCGCAACCTCTGC
CTCCTGGGATCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCATACCCAGCTAATTTTATGTTTTTAGTAGAGAC
GGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACTTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGTGCCAC
TGTACCCGGCTAATTTCTGTACTTTTTAGTAGAGATGAGCTTTCACCATGTTGGCCAGGCGGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCG
GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCCACTCTGCAGTCTTTACAGCCTTTTTATGTTTCTTGAGTTACCCTATTGCCT

Expression



Full and truncated open reading frames discovered in TCONS_00249090

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.