Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000257696 | hypoxia inducible lipid droplet-associated | protein coding | TCONS_00229590 | 523 | 304 | UTR3 | Trans | |
ENST00000262031 | RNA binding motif, single stranded interacting protein 2 | protein coding | TCONS_00229590 | 601 | 398 | UTR3 | Trans | |
ENST00000263026 | eukaryotic elongation factor-2 kinase | protein coding | TCONS_00229590 | 557 | 454 | UTR3 | Trans | |
ENST00000263955 | serine/threonine kinase 17b | protein coding | TCONS_00229590 | 553 | 302 | UTR3 | Trans | |
ENST00000338977 | zinc finger protein 721 | protein coding | TCONS_00229590 | 560 | 310 | UTR3 | Trans | |
ENST00000339732 | polypeptide N-acetylgalactosaminyltransferase 15 | protein coding | TCONS_00229590 | 606 | 302 | UTR3 | Trans | |
ENST00000359543 | epithelial membrane protein 2 | protein coding | TCONS_00229590 | 594 | 323 | UTR3 | Trans | |
ENST00000399322 | diacylglycerol kinase, beta 90kDa | protein coding | TCONS_00229590 | 528 | 299 | UTR3 | Trans | |
ENST00000478730 | ORAI calcium release-activated calcium modulator 2 | protein coding | TCONS_00229590 | 579 | 284 | UTR3 | Trans | |
ENST00000572705 | transient receptor potential cation channel, subfamily V, member 1 | protein coding | TCONS_00229590 | 721 | 400 | UTR3 | Trans | |
ENST00000591226 | tropomyosin 4 | retained intron | TCONS_00229590 | 603 | 304 | noncoding | Trans | |
TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | TCONS_00229590 | 621 | 273 | UTR3 | Trans | |
TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00229590 | 656 | 305 | UTR3 | Trans | |
TCONS_00030592 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00229590 | 656 | 305 | UTR3 | Trans | |
TCONS_00051891 | RNA binding motif, single stranded interacting protein 2 | novel protein coding | TCONS_00229590 | 622 | 304 | UTR3 | Trans | |
TCONS_00051899 | RNA binding motif, single stranded interacting protein 2 | novel protein coding | TCONS_00229590 | 601 | 398 | UTR3 | Trans | |
TCONS_00053851 | transmembrane protein 263 | novel protein coding | TCONS_00229590 | 619 | 299 | UTR5 | Trans | |
TCONS_00088780 | synaptotagmin XVII | novel protein coding | TCONS_00229590 | 617 | 289 | UTR3 | Trans | |
TCONS_00089062 | eukaryotic elongation factor-2 kinase | novel protein coding | TCONS_00229590 | 557 | 454 | UTR3 | Trans | |
TCONS_00089065 | eukaryotic elongation factor-2 kinase | novel protein coding | TCONS_00229590 | 557 | 454 | UTR3 | Trans | |
TCONS_00089066 | eukaryotic elongation factor-2 kinase | novel protein coding | TCONS_00229590 | 557 | 454 | UTR3 | Trans | |
TCONS_00098643 | fatty acid 2-hydroxylase | novel protein coding | TCONS_00229590 | 629 | 296 | UTR5 | Trans | |
TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | TCONS_00229590 | 629 | 296 | UTR3 | Trans | |
TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | TCONS_00229590 | 629 | 296 | UTR3 | Trans | |
TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | TCONS_00229590 | 629 | 296 | UTR3 | Trans | |
TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | TCONS_00229590 | 721 | 400 | UTR3 | Trans | |
TCONS_00116668 | desmoglein 3 | novel protein coding | TCONS_00229590 | 666 | 305 | UTR3 | Trans | |
TCONS_00119961 | ring finger protein 152 | novel protein coding | TCONS_00229590 | 633 | 302 | UTR5 | Trans | |
TCONS_00132233 | zinc finger protein 43 | novel protein coding | TCONS_00229590 | 602 | 272 | UTR5 | Trans | |
TCONS_00132247 | zinc finger protein 43 | novel noncoding | TCONS_00229590 | 604 | 401 | noncoding | Trans | |
TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | TCONS_00229590 | 617 | 308 | UTR3 | Trans | |
TCONS_00149280 | Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} | novel protein coding | TCONS_00229590 | 544 | 302 | UTR3 | Trans | |
TCONS_00153158 | serine/threonine kinase 17b | novel protein coding | TCONS_00229590 | 553 | 302 | UTR3 | Trans | |
TCONS_00163367 | runt-related transcription factor 1 | novel protein coding | TCONS_00229590 | 572 | 319 | UTR3 | Trans | |
TCONS_00195633 | aspartylglucosaminidase | novel protein coding | TCONS_00229590 | 529 | 282 | UTR3 | Trans | |
TCONS_00203122 | Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) | novel protein coding | TCONS_00229590 | 564 | 321 | UTR3 | Trans | |
TCONS_00211226 | antisense | novel protein coding | TCONS_00229590 | 601 | 301 | UTR5 | Trans | |
TCONS_00215909 | O-acyl-ADP-ribose deacylase 1 | novel protein coding | TCONS_00229590 | 590 | 304 | UTR3 | Trans | |
TCONS_00216910 | high mobility group nucleosomal binding domain 3 | novel noncoding | TCONS_00229590 | 611 | 294 | noncoding | Trans | |
TCONS_00230128 | solute carrier family 26 (anion exchanger), member 5 | novel protein coding | TCONS_00229590 | 601 | 297 | UTR3 | Trans | |
TCONS_00233718 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 | novel protein coding | TCONS_00229590 | 616 | 306 | UTR5 | Trans | |
TCONS_00247058 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | novel protein coding | TCONS_00229590 | 600 | 295 | UTR3 | Trans |
>TCONS_00247058 (5370 nt)
ACTGCAGGACCCTCGGATTTTTGCTGTCCAGGCACCTCGCCCTTCGCTTCATGGCCTTCTAGTAGTTCCAGGGTGTTCGCAGTTGTGACCTGCTTCCCGT
GAGCCTCTGCTCTACGCCCCTGGATGGGGCGTGCATTCCCTACCCAGCAGCCCTCGCGCGGTCCGGCACAGCGGACACCAGGACTCCAAAATGGCGTCAG
TTGTACCAGTGAAGGACAAGAAACTTCTGGAGGTCAAACTGGGGGAGCTGCCAAGCTGGATCTTGATGCGGGACTTCAGTCCTAGTGGCATTTTCGGAGC
GTTTCAAAGAGGTTACTACCGGTACTACAACAAGTACATCAATGTGAAGAAGGGGAGCATCTCGGGGATTACCATGGTGCTGGCATGCTACGTGCTCTTT
AGCTACTCCTTTTCCTACAAGCATCTCAAGCACGAGCGGCTCCGCAAATACCACTGAAGAGGACACACTCTGCACCCCCCCACCCCACGACCTTGGCCCG
AGCCCCTCCGTGAGGAACACAATCTCAATCGTTGCTGAATCCTTTCATATCCTAATAGGAATTAACCTCCAAATAAAACATGACTGCAGTGCTTTGAAAG
CATGAAGCATACCCTGCACTCCCTGGCTCCCTGCAGGATTCCAGCCTCCTGCCGGGCTCCCTGCACAGGACCAGAGCCAGCCTCACGCTGACCCACAGAG
CTGCTTCCCGGGAAACCTGGAAGTGCAGACCTGAGCGGGGACCCTGGGGACTCCTTCCAGCAGGGAGCACATCTCTGCCAGACTCCGTGCCAGCCCCACT
GACTCCACCCGGGCTCCCGCTTCTCCACGCAGGCCACTCAGGACAGCTGAGGCCACGCATTCTCTAAGCAGGGCTCAAGGCAAGTTTGTTGCTACCAGAA
GACACATCTGAGGCTGTTATTTTGAAGGGCTATTTAGGATGGCTGAGATGTCACCAGGATCATGGCTCCTGGAGAGAAGGAACCAGCTCGGGCCTGAGAG
GCAATGCCCACGCTGGAGGGAGAAGTGGGTTTCAGGGAGAAGGTGGACGTGGACAGAAACCAACCACGGACATAATGCAGCCAGCTGCACAACTCGCTGC
TTCCGGGTCACCCTCGTTAGCCTCAAATCCGAGTGATTGAAAGAGCTCCAAACACTGAAGCACTCCAAAGTGATGCGCGGGGCCAGGCGTGGTGGCTCAC
GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACTCGAGCCCAGGAGTTCAAGACCAGTATGTGAAACATAGCGAGACCCTATGTCTTTA
AAAAAAAAAAAAAAAAAAAAGAGATGAGCAGAAAATAGCCACACTGTCCCCTAAAAGCTGGCTGAGGCTGGCAGGTTCTGCCAGAGTTCTCCTCTGAGAA
TAGAAAGATGGGAAAAGCAGGCAGAGACAGTGTGGGCACTGAGCAGCCAGCGGACCCCTCTGCACCCTGGTTCTCAGCAGAGCCTCCAGGGCTCCAGGCG
CCTTACCGAACTTGGAGTAGAAGTAGCACTCGGGCATCTTGGTCATGTCATACTCATGCAGGAACTCACACTGGTCCCCTTTCTTGCATAGGCCACGCAG
CCAGTGTTTGCACACAACTGTCTTCTCACCACTGATGTGGCGAAACGGACACATGCCCCCTGCCGGCAAGATAGGGACAGGGTGTCAGCAGAGAGGCCAC
CCTGAGCCTGGGGGACACGGCCTGAAGAAGCTGAGGTACCTTCACTTCCTAACTCCTGGAGCCACCTGAAGGCATCACGTCCTGGAAAGGGGCAGAGGTC
CCCCTCACAGAAGGCAACATGATTTGAGGTACTACACTGACAGACATTTTACATTTTAATAGTTACTCATGGCCGGGCGCAGTGGATCACGCTGGTAATC
CCAGCACTTTGGAAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTGGCACGGAGACCATCCTGGCTGTCACGGTGAAATCCT
GTCTCTTCTAAAAATACAAAAAATTAGCCGCGCATGGTGGCTGGCGCCTATAGTCCCAGCTACTCGGGAGGCTGAGGCAGGACAACAGCGTGAACCCGGG
AGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACACCAGCCTGGGCAACAGAGCAAGACACCTTTTCAAAAAAAAAAAAAAAAAAGTTACTCATG
ATCTCACAGATATTACTGTAAGATGGAGGAATTAAAAGGGGGGAGGTGCTGGGAGGCTGAGGTGGGTAGATCACGAGGTCAGGAGTTCGAGACCAGCCTG
GCTGACATGGTGAAACCCCATCTCTACTAAAAGTACAAAAAAAATTAGCCCGGCTTGCGGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCT
GGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGACCGGAGATCACGCCATTGCACTCCAGCCTGGATGACAAGAACAAAACTCTGTCTCAAAAAA
AAAAAAAAGAAAAAAAAAAAGAAAGGAACTTGGCCGGGTGTAGGAGCTCAAATCTATGATCCTAGCACTTTGGAAGGCCAAGACAGGAGAATCACTTGAG
CCAAGAAGTTCGAGATCAGCCTGAGATCTTGTCTTCACTACATAAATAAATAAGTAAGTAAGTAAGTAAGCCAGCCAAGCAAGCTTGGGGACCAGGCACA
GTGGCTCACACCTGCAATCGCAGTAGTTTGGGAGGCCAAGGCAGGTGCATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATAATGAAACCCT
GTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGTGTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGG
AGGCAGAAGTTGCAGTGAACCAAGATGACACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGCTGGGTATGGTGGTGTACACCTGTAGTCCTGGCTACTGAGGAGGCTGAGGTGGGAGGATCACTTGGGCCCAGGAGGTCAAGCTTGCAGTCA
GCTATGACTGTGCCACTGCACTCCAGCCTGGGTGACAGAGTAAGATGCTGCCTCTTTTTTAAAAAAAAAAAAAAAGGAAAGACCAATTTCAGAATTGAGG
AAATGTGATGTATACACATGGAGGGACGTGTCCCTTCTGGGACAGGACCTGATGGGACAGAGCCAGCCTCTGGGGATGTGTGAGACTTCTAACGGGTGGC
CTGGCAAGACCACCATGGAGGTCCGACCAGAATGAGGCCGCTGTACACTTCTGCTGTCCAATATGGCAGCTGCTAGCCCCATGTGACTACTGAGCACTTG
AAATATGACTAGTGTGTCTGAGAATTTTGTTTTAAATGTGATTTGATTTTACTTAAATTTGAACTGCCACATGTGACTAGTGGCTACTGTATTAGTCAAC
AGAGAGACAGAATGCCCTGTGTTAGGGATGGCTGTGCTAACAGAAGGTGGCTGGTCAGAAGGGCAGAATTACTGAGCAAAGACATGGGAATGAGACCAGA
AACTCAGTGGAGGTAATGACGTTCTGACTGGACAGTGTGAAGGTGGCCTGGCTGATCTGCCAGAAAGTCTCCTACCTCAGTGGTAAATGACTACGTTATA
GAAGCAAAACTCACCAAAACCATTCATTAAAACCAGCCCTTTGCTCTGATTCTCTGCTCTCTTTTTCAAGCTTCTGATTAATATTTAAGTCTCCTAAATA
AATTTTCCTACAGGGAGAAAAATGCCCAGACCATGGAAAGTTTAGGTTGTACCTAGTGATACTTCTTTCTTTCTTTTTTTTTTGTTTTGTTTTGTTAAGA
CAGAGTCTCACTCTGTTACCTAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGCCTAACAGGTTCAAGTGATTCTCCTGCCTCAGCCT
CCCCAGTAGCTGGGATTACAGACGGGCGTCACCATGCCCAGCTAATTTTTGAATTTTTAGTAGAGACGATGTTTCACCATGTTGGCCAGGCTGGTCTCAA
ACTCCTGACCTCAGGTGATCCATCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCACCACGCCTGACCCCTAGTGATACTTCTGATGGAT
TAGCCCGGCCCACATACAATTATTAAAAGAGCACAGCCAGAGGGGTAACAAGATGGCGACCAAGACAGTGGAGCTCCATAAGCTGAAGCTTGCTGAACTA
AAGTAAGAATGAATGTCTTGCTCGTGGTTTGGAGACGAGCAAATAAAGCAAGATTTTTTTTTTTTTTGAGATAGAGTCTTGCTCTGTTGCCAGGCTGGAG
TGCAATGGCACGATCTCGGCTCACTGCAACCTCTGACTCCCTGGTTCAAGGGATTCTCGCACCTCAGTAGTTTTGTGTAGTCTGTGTTGAGGGCTGGTTA
TCGAGAACAAGACCCCGCAAGATGGGTTATCATGGGGTGTTTCGATGGGAGGCCACAGAAAACCATGAGCCAGTGGAAACTATGGAATGAGAAAGACCTG
GGTTCAGACACTGGGCTCTGCCGCTTATTAACTCTGTGACATTGAGAAAGTTCCTGAGTGTCTCAATGCTGGGGGCTTCTCTCCATGTCACAGGTCAGCT
TGTGGCCACGGGGAATGCGAAGTGATAAGGCAGCCTTAGAGCCAGGTTCAGTCCTGCGTTTAGGTTTCAGGTGGAACACCCCATCAGGGTCCTAGCCTGT
CCAAACCAGTTTTATCTACAGAGATCGTTAGTCTGTAGAAAGCAATGTAAGCCAGAGACCTGGCGGCCTCCAAGTCTGCCGGGGAGAAGGAGGTGGGAGG
GCGCCTCCGGAGGCACATCAGGGAGCCCGGAGTTTCTTACCTTTGCCGCAGGCAGCTTTCAAAAAGAATTCACAGACAGCAGCGCCCGACTCTGTAGAAA
GGAGAGAAAAGGAGAGGAATCAAAGAGGTGCAATTTGCTATTGACAATGTCTGAAGACAGTGGGAGGGAACCCTTCTGACCTCTGACCCACCAAGGGTTC
AGGGTACAGGAAATAAAGTAGCAAAAATTTGCAAAGCCCAACCAAGCAAGGAAGAAGCTGCTTAAGTTAGTCACGCCCTACAAAATGAGACACATACATT
GAGAACAGTCATTACCCAGTGCTTTGAGAGCCTCCTGTATATAAGATCCTTTCAAGGAGTTAAGAGTGGGTGGGGAAAGGAAGGCTGGAGTACGAGATCA
CAGAAATAATTTTTTTTTTTTTGAGATGGGGTTTCGCTCTAGTTGCCTGGGCTGGAGTGCAATGACGCGAT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.