| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000217185 |
protein tyrosine kinase 6 |
protein coding |
TCONS_00238624 |
622 |
287 |
UTR3 |
Trans |
|
|
ENST00000257287 |
centrosomal protein 135kDa |
protein coding |
TCONS_00238624 |
557 |
306 |
UTR3 |
Trans |
|
|
ENST00000323816 |
growth arrest-specific 7 |
protein coding |
TCONS_00238624 |
603 |
289 |
UTR3 |
Trans |
|
|
ENST00000336787 |
RAB27A, member RAS oncogene family |
protein coding |
TCONS_00238624 |
629 |
303 |
UTR3 |
Trans |
|
|
ENST00000378004 |
Rho GTPase activating protein 26 |
protein coding |
TCONS_00238624 |
691 |
298 |
UTR3 |
Trans |
|
|
ENST00000396307 |
RAB27A, member RAS oncogene family |
protein coding |
TCONS_00238624 |
629 |
303 |
UTR3 |
Trans |
|
|
ENST00000405000 |
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 |
retained intron |
TCONS_00238624 |
638 |
298 |
noncoding |
Trans |
|
|
ENST00000422247 |
centrosomal protein 135kDa |
protein coding |
TCONS_00238624 |
649 |
281 |
UTR3 |
Trans |
|
|
ENST00000424496 |
sense_intronic |
sense intronic |
TCONS_00238624 |
680 |
294 |
noncoding |
Trans |
|
|
ENST00000437099 |
growth arrest-specific 7 |
protein coding |
TCONS_00238624 |
603 |
289 |
UTR3 |
Trans |
|
|
ENST00000463496 |
aryl hydrocarbon receptor |
nonsense mediated decay |
TCONS_00238624 |
551 |
296 |
UTR3 |
Trans |
|
|
ENST00000542869 |
protein tyrosine kinase 6 |
protein coding |
TCONS_00238624 |
642 |
301 |
UTR3 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
TCONS_00238624 |
682 |
301 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
TCONS_00238624 |
614 |
297 |
UTR3 |
Trans |
|
|
ENST00000623752 |
TEC |
TEC |
TCONS_00238624 |
645 |
295 |
noncoding |
Trans |
|
|
TCONS_00001594 |
lincRNA |
novel protein coding |
TCONS_00238624 |
723 |
296 |
UTR5 |
Trans |
|
|
TCONS_00010841 |
epoxide hydrolase 1, microsomal (xenobiotic) |
novel protein coding |
TCONS_00238624 |
595 |
298 |
UTR3 |
Trans |
|
|
TCONS_00011236 |
solute carrier family 35, member F3 |
novel protein coding |
TCONS_00238624 |
624 |
303 |
UTR3 |
Trans |
|
|
TCONS_00021902 |
protein tyrosine phosphatase, non-receptor type 14 |
novel protein coding |
TCONS_00238624 |
606 |
254 |
UTR3 |
Trans |
|
|
TCONS_00021903 |
protein tyrosine phosphatase, non-receptor type 14 |
novel protein coding |
TCONS_00238624 |
606 |
254 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
TCONS_00238624 |
684 |
296 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
TCONS_00238624 |
661 |
290 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
TCONS_00238624 |
661 |
288 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
TCONS_00238624 |
723 |
294 |
UTR3 |
Trans |
|
|
TCONS_00030584 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00238624 |
602 |
303 |
UTR3 |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00238624 |
629 |
298 |
UTR3 |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
TCONS_00238624 |
689 |
292 |
UTR3 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
TCONS_00238624 |
701 |
296 |
UTR5 |
Trans |
|
|
TCONS_00041296 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
TCONS_00238624 |
682 |
296 |
UTR3 |
Trans |
|
|
TCONS_00041298 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
TCONS_00238624 |
682 |
296 |
UTR3 |
Trans |
|
|
TCONS_00046540 |
sestrin 3 |
novel protein coding |
TCONS_00238624 |
648 |
314 |
UTR5 |
Trans |
|
|
TCONS_00050195 |
FYVE, RhoGEF and PH domain containing 4 |
novel protein coding |
TCONS_00238624 |
643 |
299 |
UTR5 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00238624 |
681 |
295 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00238624 |
672 |
290 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
TCONS_00238624 |
732 |
294 |
UTR3 |
Trans |
|
|
TCONS_00065093 |
UBA domain containing 2 |
novel protein coding |
TCONS_00238624 |
669 |
320 |
UTR5 |
Trans |
|
|
TCONS_00065094 |
UBA domain containing 2 |
novel protein coding |
TCONS_00238624 |
669 |
320 |
UTR5 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
TCONS_00238624 |
708 |
296 |
UTR3 |
Trans |
|
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
TCONS_00238624 |
673 |
281 |
UTR5 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
TCONS_00238624 |
673 |
281 |
UTR3 |
Trans |
|
|
TCONS_00075834 |
forkhead box N3 |
novel protein coding |
TCONS_00238624 |
640 |
295 |
UTR3 |
Trans |
|
|
TCONS_00075835 |
forkhead box N3 |
novel protein coding |
TCONS_00238624 |
640 |
295 |
UTR3 |
Trans |
|
|
TCONS_00075917 |
ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
novel noncoding |
TCONS_00238624 |
697 |
293 |
noncoding |
Trans |
|
|
TCONS_00082423 |
transcribed_processed_pseudogene |
novel protein coding |
TCONS_00238624 |
702 |
295 |
UTR3 |
Trans |
|
|
TCONS_00083866 |
RAB27A, member RAS oncogene family |
novel protein coding |
TCONS_00238624 |
629 |
303 |
UTR3 |
Trans |
|
|
TCONS_00090929 |
nucleoporin 93kDa |
novel protein coding |
TCONS_00238624 |
769 |
311 |
UTR3 |
Trans |
|
|
TCONS_00098644 |
fatty acid 2-hydroxylase |
novel protein coding |
TCONS_00238624 |
606 |
292 |
UTR3 |
Trans |
|
|
TCONS_00098645 |
fatty acid 2-hydroxylase |
novel protein coding |
TCONS_00238624 |
606 |
292 |
UTR3 |
Trans |
|
|
TCONS_00098647 |
fatty acid 2-hydroxylase |
novel protein coding |
TCONS_00238624 |
606 |
292 |
UTR3 |
Trans |
|
|
TCONS_00101152 |
myosin phosphatase Rho interacting protein |
novel protein coding |
TCONS_00238624 |
678 |
295 |
UTR5 |
Trans |
|
|
TCONS_00101169 |
myosin phosphatase Rho interacting protein |
novel protein coding |
TCONS_00238624 |
678 |
295 |
UTR5 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
TCONS_00238624 |
638 |
301 |
UTR3 |
Trans |
|
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
TCONS_00238624 |
638 |
301 |
UTR3 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
TCONS_00238624 |
696 |
295 |
UTR5 |
Trans |
|
|
TCONS_00109427 |
serine hydroxymethyltransferase 1 (soluble) |
novel protein coding |
TCONS_00238624 |
685 |
296 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
TCONS_00238624 |
673 |
302 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
TCONS_00238624 |
649 |
296 |
UTR3 |
Trans |
|
|
TCONS_00118919 |
potassium channel tetramerization domain containing 1 |
novel protein coding |
TCONS_00238624 |
698 |
295 |
UTR3 |
Trans |
|
|
TCONS_00119049 |
GRB2 associated, regulator of MAPK1 |
novel protein coding |
TCONS_00238624 |
690 |
295 |
UTR3 |
Trans |
|
|
TCONS_00133831 |
carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) |
novel protein coding |
TCONS_00238624 |
673 |
297 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
TCONS_00238624 |
624 |
294 |
UTR3 |
Trans |
|
|
TCONS_00147100 |
ATPase family, AAA domain containing 2B |
novel protein coding |
TCONS_00238624 |
698 |
295 |
UTR3 |
Trans |
|
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
TCONS_00238624 |
698 |
295 |
UTR3 |
Trans |
|
|
TCONS_00147115 |
ATPase family, AAA domain containing 2B |
novel protein coding |
TCONS_00238624 |
698 |
295 |
UTR3 |
Trans |
|
|
TCONS_00149280 |
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} |
novel protein coding |
TCONS_00238624 |
657 |
297 |
UTR3 |
Trans |
|
|
TCONS_00149280 |
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} |
novel protein coding |
TCONS_00238624 |
614 |
295 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
TCONS_00238624 |
652 |
294 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
TCONS_00238624 |
643 |
294 |
UTR3 |
Trans |
|
|
TCONS_00160920 |
protein tyrosine kinase 6 |
novel protein coding |
TCONS_00238624 |
642 |
301 |
UTR3 |
Trans |
|
|
TCONS_00160924 |
protein tyrosine kinase 6 |
novel protein coding |
TCONS_00238624 |
642 |
301 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00238624 |
700 |
295 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00238624 |
700 |
295 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
TCONS_00238624 |
700 |
295 |
UTR3 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
TCONS_00238624 |
714 |
295 |
UTR5 |
Trans |
|
|
TCONS_00174266 |
GRAM domain containing 1C |
novel protein coding |
TCONS_00238624 |
619 |
294 |
UTR5 |
Trans |
|
|
TCONS_00182611 |
processed_transcript |
novel protein coding |
TCONS_00238624 |
687 |
292 |
UTR3 |
Trans |
|
|
TCONS_00182613 |
processed_transcript |
novel protein coding |
TCONS_00238624 |
687 |
292 |
UTR3 |
Trans |
|
|
TCONS_00182614 |
processed_transcript |
novel protein coding |
TCONS_00238624 |
687 |
292 |
UTR3 |
Trans |
|
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
TCONS_00238624 |
726 |
301 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
TCONS_00238624 |
637 |
293 |
UTR5 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
TCONS_00238624 |
637 |
293 |
UTR3 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
TCONS_00238624 |
635 |
266 |
UTR5 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
TCONS_00238624 |
663 |
295 |
UTR3 |
Trans |
|
|
TCONS_00190498 |
palladin, cytoskeletal associated protein |
novel protein coding |
TCONS_00238624 |
630 |
291 |
UTR3 |
Trans |
|
|
TCONS_00190799 |
sorting nexin 25 |
novel protein coding |
TCONS_00238624 |
688 |
299 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
TCONS_00238624 |
622 |
297 |
UTR5 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
TCONS_00238624 |
632 |
298 |
UTR3 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
694 |
296 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
694 |
296 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
657 |
282 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
724 |
295 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
685 |
284 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
TCONS_00238624 |
724 |
295 |
UTR3 |
Trans |
|
|
TCONS_00203985 |
family with sequence similarity 169, member A |
novel protein coding |
TCONS_00238624 |
619 |
294 |
UTR5 |
Trans |
|
|
TCONS_00205414 |
prolyl 4-hydroxylase, alpha polypeptide II |
novel protein coding |
TCONS_00238624 |
731 |
287 |
UTR3 |
Trans |
|
|
TCONS_00213181 |
tubby like protein 4 |
novel protein coding |
TCONS_00238624 |
741 |
300 |
UTR3 |
Trans |
|
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
TCONS_00238624 |
741 |
300 |
UTR3 |
Trans |
|
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
TCONS_00238624 |
714 |
294 |
UTR5 |
Trans |
|
|
TCONS_00226753 |
cell division cycle associated 7-like |
novel protein coding |
TCONS_00238624 |
650 |
295 |
UTR3 |
Trans |
|
|
TCONS_00227594 |
GLI family zinc finger 3 |
novel protein coding |
TCONS_00238624 |
511 |
212 |
UTR3 |
Trans |
|
|
TCONS_00235205 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00238624 |
645 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235219 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00238624 |
645 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235231 |
epithelial splicing regulatory protein 1 |
novel protein coding |
TCONS_00238624 |
645 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235708 |
oxidation resistance 1 |
novel protein coding |
TCONS_00238624 |
688 |
300 |
UTR3 |
Trans |
|
|
TCONS_00235708 |
oxidation resistance 1 |
novel protein coding |
TCONS_00238624 |
647 |
301 |
UTR3 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
TCONS_00238624 |
678 |
297 |
UTR3 |
Trans |
|
|
TCONS_00245543 |
long intergenic non-protein coding RNA 963 |
novel protein coding |
TCONS_00238624 |
723 |
295 |
UTR3 |
Trans |
|
|
TCONS_00247058 |
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
novel protein coding |
TCONS_00238624 |
676 |
292 |
UTR3 |
Trans |
|
|
TCONS_00247576 |
contactin associated protein-like 3 |
novel protein coding |
TCONS_00238624 |
663 |
281 |
UTR3 |
Trans |
|
|
TCONS_00247594 |
contactin associated protein-like 3 |
novel protein coding |
TCONS_00238624 |
663 |
281 |
UTR3 |
Trans |
|
|
TCONS_00256068 |
shroom family member 4 |
novel protein coding |
TCONS_00238624 |
648 |
300 |
UTR3 |
Trans |