Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000280154 | programmed cell death 4 (neoplastic transformation inhibitor) | protein coding | TCONS_00247818 | 550 | 300 | UTR3 | Trans | |
ENST00000330676 | TLC domain containing 2 | protein coding | TCONS_00247818 | 631 | 298 | UTR3 | Trans | |
ENST00000424496 | sense_intronic | sense intronic | TCONS_00247818 | 512 | 291 | noncoding | Trans | |
TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | TCONS_00247818 | 606 | 296 | UTR3 | Trans | |
TCONS_00023682 | pre-mRNA processing factor 18 | novel protein coding | TCONS_00247818 | 601 | 297 | UTR3 | Trans | |
TCONS_00023685 | pre-mRNA processing factor 18 | novel protein coding | TCONS_00247818 | 601 | 297 | UTR3 | Trans | |
TCONS_00023687 | pre-mRNA processing factor 18 | novel protein coding | TCONS_00247818 | 601 | 297 | UTR3 | Trans | |
TCONS_00023689 | pre-mRNA processing factor 18 | novel protein coding | TCONS_00247818 | 601 | 297 | UTR3 | Trans | |
TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00247818 | 533 | 298 | UTR3 | Trans | |
TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00247818 | 603 | 299 | UTR3 | Trans | |
TCONS_00030592 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | TCONS_00247818 | 603 | 299 | UTR3 | Trans | |
TCONS_00043422 | vacuolar protein sorting 37 homolog C (S. cerevisiae) | novel protein coding | TCONS_00247818 | 623 | 302 | UTR5 | Trans | |
TCONS_00057601 | transcribed_unprocessed_pseudogene | novel protein coding | TCONS_00247818 | 612 | 293 | UTR3 | Trans | |
TCONS_00116668 | desmoglein 3 | novel protein coding | TCONS_00247818 | 609 | 297 | UTR3 | Trans | |
TCONS_00124891 | zinc finger protein 540 | novel protein coding | TCONS_00247818 | 638 | 297 | UTR5 | Trans | |
TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | TCONS_00247818 | 632 | 296 | UTR3 | Trans | |
TCONS_00194652 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00247818 | 606 | 286 | UTR5 | Trans | |
TCONS_00194655 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00247818 | 606 | 286 | UTR5 | Trans | |
TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | TCONS_00247818 | 626 | 297 | UTR3 | Trans | |
TCONS_00213738 | enoyl-CoA delta isomerase 2 | novel protein coding | TCONS_00247818 | 576 | 297 | UTR3 | Trans | |
TCONS_00235205 | epithelial splicing regulatory protein 1 | novel protein coding | TCONS_00247818 | 608 | 300 | UTR3 | Trans | |
TCONS_00235219 | epithelial splicing regulatory protein 1 | novel protein coding | TCONS_00247818 | 608 | 300 | UTR3 | Trans | |
TCONS_00235231 | epithelial splicing regulatory protein 1 | novel protein coding | TCONS_00247818 | 608 | 300 | UTR3 | Trans | |
TCONS_00240685 | metastasis suppressor 1 | novel protein coding | TCONS_00247818 | 535 | 233 | UTR3 | Trans | |
TCONS_00243477 | osteoclast stimulating factor 1 | novel protein coding | TCONS_00247818 | 602 | 305 | UTR5 | Trans | |
TCONS_00243482 | osteoclast stimulating factor 1 | novel protein coding | TCONS_00247818 | 602 | 305 | UTR5 | Trans | |
TCONS_00243503 | proprotein convertase subtilisin/kexin type 5 | novel protein coding | TCONS_00247818 | 539 | 298 | UTR3 | Trans | |
TCONS_00243507 | proprotein convertase subtilisin/kexin type 5 | novel protein coding | TCONS_00247818 | 539 | 298 | UTR3 | Trans | |
TCONS_00247058 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | novel protein coding | TCONS_00247818 | 609 | 289 | UTR3 | Trans |
>TCONS_00247058 (3700 nt)
ATTCACTATTTATGATTGAATGATTATCATATTAAAGAGGTGAGAAAATAAAAATAAGTCTGATGTGCACAAAGCCATACTGCTCAAATTGTTTGATAAT
ATCTGTTAATTAAATTATTATGACATCGGTAGAAGAATGATGTTTTGTTTATATGTGGTTAGAATTGGTCTTTTTTAAAGGAAATAACAAGAGAGATGGA
AATGGAATGGGTATAAATAGTAAAAGGTTCTATCACTATAATTCCCTTTTGCTCTAAATAGTTAAAGCTTCTATCACTATAATTTCCATAAGAAGATATA
TGTGTTTACCTGTTAATTTTATCAGGGCAAATTAAAACATGGATAGAATCATGTTTCTCAGTGTGAAGAAATATTTTTATTTGATGAATATTATATATTT
TCAGGTGCAGTGGCTTCTATGTTTTGGGTTGATGCTGAATTAGGGAGTGATATTTACCTTGATGGTATCATAACTATTGTGGATTCAAAATATGGATTAA
AAGTGAAATACCACTAAAGGCAGAAGAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGTAAGTTCTT
AGAAGTTTAAATTCAGTGTTTAAAAATTAGTGTCTGTTTTGTATCCAACCTCATATCTGAACGTGTTAATTTTTTTTTTTTTTTGAGACAGAGTCTCACT
CTGTTGCCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCCCTTGTCTCAGCCTCCTGAGTATCTG
GGATTACAGGTGCACACCACCATGGCCAGCTAATTTTGTATTTTTAGTAGAGACAGGATTTTACCATGTTGACCAGCCTGGTCATGAACTCCTGACCTCA
AGTGATCCACTTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCCGGCCTGAACTTGTTAATGTTTAAGTTTGCTTTTTTTTCC
CAAATCTTTGCTGAAATTATGCTCTAAGGGGATATGTCAGGTTTGTCAAATAGCTACCAATACCTCTTCACTGGGCCTTCTCTCCCTCGTTGATAGAGTG
CCCTAATTTGAAAAGTTTGGAAGAAAACTCCTTTTTTAGAGTTTAAAATCTCAATTTATGAATTTATGAATATAATTTAAGAATCAAAGAATGATCCCAA
ATACAGTATTACAGTTTCACGCAGAAAAATTCCAATGACTGTTGGAAATCATATTTCTTGCAAAATGCTTATGGAGGTAGCAAAAAAGCCCCAAATTATT
CATTTTGAATGTTTATTATAGGCATGTTTGAATCTACCTCTTCCATAAATTAATTACAAAATTTGATATACCTATGTGACAGATAACTGCTAAGACATTT
TGTTTTTTTTTTTATTTTGATAAACTGAAAATGCCATGCTAAAAGTCAAACTGTTTATGTATTTTATGATTATAGGAAAAATTTTATATGTATAGTTGGG
TATGGAGAAGAGTTAAATAGAATCTATTATCAGCATGATGGAGGCCAAAAAAACAAAGCAACATTCTGAATAATGCAAACACAGTAAACGTTTAACCTTC
TGCTACCTTGATAAAACCTCTTAAATTATTAAATCAATATACCTACACAAAACTGACACACTGTCAGGATAATGGAAACTTTAAATTTTCTAAGTCGGAT
GCCAGATAAATAACTTTGCCTTGATATAAAGAATTTTCCAACTTGTCCAATTCCTCTGGTTGCAAAGCTTGACCTCAGTAGCTGCTTGTGATTCAGAGAA
TTCTGAGGCAGTACAAGTAATGACACTTGGATAATGGGCAGCAATTTAAGAATGTCATGCTTCACAGAGCCAGCCCATGACAAGTAAAGCTGAGAAATGG
TACCCTGTGGCCAGCCAGCCAAATTGAAACTGAAGTGGTAATTGATATCATGGGGTATCACTCTAATGGGATTGTCACCCATTGATCTGAAATATTCATT
TTTTAATCATAGGCAAAGAATTGGACAACTTAAAATGACAGCTCTCTATTCTGAGGACTTGACACCCGGGCTACTGACATTGTTCTTTTCAGTTCTACAA
ATGTGACAGCATTTAATGCAATAGAAGCAATGAATGAAGTTACCCAGAGAAGGTCAAGTGAGAGGTTTCTTCTTGGTTCCTCTGTTATGTTGCACAATCT
GTTGAAACAATTCAGTCAGAAAACAGTTAGCTTGGAAAAGGCCAGAACAATAAATAGACTGACATTATGCAATAATTTTTTAAAAACTAAAATAGTGTTA
CATCTGTAACCAATCCATTTGAAAGAAATAGTTCCTGCTGCTGCTTTTTAAAAATGACACCAGACATCTTTGACACTAGATTTATTTCCACTCTGGTCAA
CAGCAGTGTTCTTTCATAGCCAGTGGGTTTTAAGACAGTTTTTTCTTTTCTTTCTTTCTCTTTTTTCGGTCCGGCTTCTTTCTTTATTTCTGCAGAAAAG
GACACCCTATAGCCCTTCATGAAGTTAGGTCTACAGTGGTGTTATTTCAGAGAGTTCCTTTGTTTCTCTCCCTAACCCCCCAGCTTTATTGAGGTATAAT
TGACAAGTAAAAACTATATATATTTAAGGTATACAGTGTGTGAATTACATTATCAAACAATCGAGCTAGTTAACCTATCCATCACCTCACATTGCTATTT
TTTTGAGAGGGGGTGGTAAGAACAATTAAGATCTATGTTTTAGCAGATTCAAGTATACAATAGAATTAACTACAGTCATCATGCTGTAATTAGCTCTCCA
TGACTTATGCATCTTGTATAACAAACTTTGTATTCTTTGACCAACATCTCACACCACTCCCCTTTAATTTCCTTTGTTTCTTGTGGTAAGTTAAATTGGG
GTTTTGATCCTTAGCCTTTTGAATATGTTGGATTAATTAGTATCAAAATTATTTTTGTCTTTTTTGATATATAAGCAAAAGCCATAGTTGTTAAGCAGAG
ATAAGGAATACTTTGGACATCTATGTAATATAAAATATTTAAAAAATATTTTGCAAATTTTTTTTCTTCATTTACTTATACAGGTGGAATACAATGCCAA
ACTTTCCATTTTGTTTTATTTTATAAATGAAAGTCATCTGACTTAATGACCAAATGGTATATAATGTATTATTGGAGAATGTTCTTTTGAATAGAAGACA
TTGATTTTATACTTTTTGCAGAGTTTGACTTGGGAAGGTAGGAAGTCACATGAGGGAAATGCAGGGCTGATGTCTAAAGAAAATAAATGTTAATATGCAC
TTATTTTTTTAAATGTTTGTATAGCTTTCCTATGGGCATAGAAGAGGACATTTATCTCTTCTGCTATAATTGTATATGATTACATATAATTTTAATACAG
CTGTAAATATTGGCAGGCTCTCATTTGGGGTGATTTTCATTTATTTTTATATTTGATACTTTCTGACTGCCTGGAAGTAGTAAAACGTTAGTCTACCACT
GTTAGCTTTGAGTGAAGAATTCTAATATTTTGGAGAGGTAAATGCATTTAAAACATTGCACATTACCTTGTGAAACTAACATTGTATTAGTTACATTTAG
GCATGGAAATGCAAAAACAAATCTGTAATTCTTCTGTCATATCATTTTTATGCCTCACAAACTCATAGCCAGATAACCCCAATTTCATATGTTAAAAAAG
C
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.