Common name: Tetraodon
Latin name: Tetraodon nigroviridis
Genome assembly: TETRAODON8
All retrocopies: 30
Parental genes: 30

Summary: Number of retrocopies :
Conserved ORF: 25 ORF 5 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_tnig_1 59.85 % 95.14 % ORF
2. retro_tnig_2 80.85 % 97.41 % ORF
3. retro_tnig_3 54.21 % 69.51 % ORF
4. retro_tnig_4 72.85 % 92.52 % ORF
5. retro_tnig_5 68.60 % 67.58 % ORF
6. retro_tnig_6 85.08 % 99.48 % ORF
7. retro_tnig_7 73.11 % 79.52 % ORF
8. retro_tnig_8 65.73 % 98.80 % ORF
9. retro_tnig_9 55.66 % 93.99 % ORF
10. retro_tnig_10 66.90 % 86.38 % ORF
11. retro_tnig_11 84.52 % 99.41 % ORF
12. retro_tnig_12 68.53 % 67.84 % ORF
13. retro_tnig_13 71.71 % 78.93 % ORF
14. retro_tnig_14 76.96 % 100.00 % ORF
15. retro_tnig_15 71.43 % 100.00 % ORF
16. retro_tnig_16 84.42 % 100.00 % ORF
17. retro_tnig_17 73.97 % 85.59 % ORF
18. retro_tnig_18 67.72 % 98.95 % ORF
19. retro_tnig_19 68.45 % 93.33 % ORF
20. retro_tnig_20 71.67 % 100.00 % ORF
21. retro_tnig_21 60.91 % 74.51 % ORF
22. retro_tnig_22 87.80 % 83.01 % ORF
23. retro_tnig_23 62.83 % 68.16 % ORF
24. retro_tnig_25 55.04 % 85.35 % ORF
25. retro_tnig_26 79.29 % 99.95 % ORF
26. retro_tnig_27 68.87 % 99.84 % ORF
27. retro_tnig_29 53.08 % 96.63 % ORF
28. retro_tnig_31 55.77 % 66.38 % ORF
29. retro_tnig_32 61.07 % 50.17 % ORF
30. retro_tnig_33 50.41 % 66.30 % ORF
# Ensembl ID Symbol Description
1. ENSTNIG00000011331 sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
2. ENSTNIG00000006325 rhogb ras homolog gene family, member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
3. ENSTNIG00000007247 gpr22 G protein-coupled receptor 22 [Source:ZFIN;Acc:ZDB-GENE-041210-48]
4. ENSTNIG00000014076 SSTR5 somatostatin receptor 5 [Source:HGNC Symbol;Acc:11334]
5. ENSTNIG00000013316 mc5ra melanocortin 5a receptor [Source:ZFIN;Acc:ZDB-GENE-021223-3]
6. ENSTNIG00000011685
7. ENSTNIG00000013601 npy8ar neuropeptide Y receptor Y8a [Source:ZFIN;Acc:ZDB-GENE-990415-175]
8. ENSTNIG00000014513 SLC5A3 (2 of 2) solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038]
9. ENSTNIG00000015814 gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
10. ENSTNIG00000009087 morn3 (2 of 2) MORN repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-152]
11. ENSTNIG00000005041 lrrc30 leucine rich repeat containing 30 [Source:ZFIN;Acc:ZDB-GENE-050506-25]
12. ENSTNIG00000010472 b4galt6 (2 of 2) UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
13. ENSTNIG00000010339 gja3 gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
14. ENSTNIG00000008476 zgc:66286 zgc:66286 [Source:ZFIN;Acc:ZDB-GENE-040426-1593]
15. ENSTNIG00000005219 KCNS1 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 [Source:HGNC Symbol;Acc:6300]
16. ENSTNIG00000003195 fem1c fem-1 homolog c (C.elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
17. ENSTNIG00000006226 KCNJ10 (1 of 2) potassium inwardly-rectifying channel, subfamily J, member 10 [Source:HGNC Symbol;Acc:6256]
18. ENSTNIG00000011060 si:rp71-39b20.4 si:rp71-39b20.4 [Source:ZFIN;Acc:ZDB-GENE-070912-704]
19. ENSTNIG00000005148
20. ENSTNIG00000015041 RHOC (2 of 2) ras homolog family member C [Source:HGNC Symbol;Acc:669]
21. ENSTNIG00000003533 neurod neurogenic differentiation [Source:ZFIN;Acc:ZDB-GENE-990415-172]
22. ENSTNIG00000004032
23. ENSTNIG00000008254 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
24. ENSTNIG00000003838
25. ENSTNIG00000008566 ube2g1a (2 of 3) ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
26. ENSTNIG00000010600 UBE2L3 (1 of 2) ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488]
27. ENSTNIG00000010978
28. ENSTNIG00000017925 RHO (1 of 2) rhodopsin [Source:HGNC Symbol;Acc:10012]
29. ENSTNIG00000006480 kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]
30. ENSTNIG00000015319 LINGO3 (1 of 2) leucine rich repeat and Ig domain containing 3 [Source:HGNC Symbol;Acc:21206]
Retrogenes FASTA BED
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Parental genes FASTA BED
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