Common name: Grape
Latin name: Vitis vinifera
Genome assembly: IGGP_12x
All retrocopies: 99
Parental genes: 74

Summary: Number of retrocopies :
Conserved ORF: 43 ORF 56 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_vvin_1 55.34 % 84.73 % ORF
2. retro_vvin_2 50.47 % 84.39 % ORF
3. retro_vvin_3 76.32 % 50.67 % ORF
4. retro_vvin_4 61.71 % 55.62 % ORF
5. retro_vvin_5 66.88 % 78.23 % ORF
6. retro_vvin_6 54.01 % 96.48 % ORF
7. retro_vvin_7 88.17 % 71.26 % ORF
8. retro_vvin_8 85.56 % 61.31 % ORF
9. retro_vvin_9 75.31 % 80.00 % ORF
10. retro_vvin_10 66.67 % 99.02 % ORF
11. retro_vvin_11 96.18 % 99.24 % ORF
12. retro_vvin_12 97.18 % 100.00 % ORF
13. retro_vvin_13 90.98 % 66.18 % ORF
14. retro_vvin_14 82.96 % 56.72 % ORF
15. retro_vvin_15 74.48 % 60.94 % ORF
16. retro_vvin_16 83.25 % 51.60 % ORF
17. retro_vvin_17 95.77 % 100.00 % ORF
18. retro_vvin_18 76.42 % 60.29 % ORF
19. retro_vvin_19 56.33 % 71.47 % ORF
20. retro_vvin_20 76.66 % 81.30 % ORF
21. retro_vvin_21 66.01 % 97.44 % ORF
22. retro_vvin_22 98.21 % 54.37 % ORF
23. retro_vvin_23 90.06 % 94.71 % ORF
24. retro_vvin_24 82.14 % 70.22 % ORF
25. retro_vvin_25 98.59 % 100.00 % ORF
26. retro_vvin_26 54.37 % 77.86 % ORF
27. retro_vvin_27 50.14 % 95.82 % ORF
28. retro_vvin_28 56.02 % 96.11 % ORF
29. retro_vvin_29 85.25 % 53.04 % ORF
30. retro_vvin_30 50.97 % 91.87 % ORF
31. retro_vvin_31 82.35 % 62.33 % ORF
32. retro_vvin_35 85.87 % 94.85 % ORF
33. retro_vvin_43 84.15 % 56.25 % ORF
34. retro_vvin_44 86.47 % 71.30 % ORF
35. retro_vvin_45 87.95 % 50.45 % ORF
36. retro_vvin_47 83.87 % 53.81 % ORF
37. retro_vvin_48 70.61 % 90.83 % ORF
38. retro_vvin_49 70.57 % 52.46 % ORF
39. retro_vvin_52 82.95 % 56.09 % ORF
40. retro_vvin_54 75.63 % 60.41 % ORF
41. retro_vvin_56 88.08 % 51.54 % ORF
42. retro_vvin_58 78.26 % 50.70 % ORF
43. retro_vvin_60 57.35 % 87.01 % ORF
44. retro_vvin_61 73.30 % 62.95 % ORF
45. retro_vvin_62 78.12 % 70.33 % ORF
46. retro_vvin_63 82.95 % 63.82 % ORF
47. retro_vvin_65 83.53 % 77.17 % ORF
48. retro_vvin_66 80.59 % 77.63 % ORF
49. retro_vvin_73 81.04 % 72.12 % ORF
50. retro_vvin_74 76.56 % 70.33 % ORF
51. retro_vvin_76 94.35 % 67.21 % ORF
52. retro_vvin_78 58.44 % 66.67 % ORF
53. retro_vvin_81 89.26 % 98.03 % ORF
54. retro_vvin_84 72.03 % 51.53 % ORF
55. retro_vvin_87 70.53 % 64.86 % ORF
56. retro_vvin_89 78.89 % 56.63 % ORF
57. retro_vvin_92 68.60 % 73.91 % ORF
58. retro_vvin_94 77.20 % 65.62 % ORF
59. retro_vvin_97 72.79 % 76.83 % ORF
60. retro_vvin_103 75.39 % 85.20 % ORF
61. retro_vvin_104 84.17 % 51.95 % ORF
62. retro_vvin_105 90.48 % 63.64 % ORF
63. retro_vvin_106 82.81 % 70.33 % ORF
64. retro_vvin_107 64.71 % 75.60 % ORF
65. retro_vvin_110 80.49 % 54.95 % ORF
66. retro_vvin_116 83.06 % 72.22 % ORF
67. retro_vvin_117 68.12 % 66.67 % ORF
68. retro_vvin_118 73.41 % 100.00 % ORF
69. retro_vvin_119 88.08 % 82.07 % ORF
70. retro_vvin_123 75.61 % 52.17 % ORF
71. retro_vvin_128 92.45 % 100.00 % ORF
72. retro_vvin_131 86.49 % 86.82 % ORF
73. retro_vvin_132 62.67 % 64.91 % ORF
74. retro_vvin_133 79.43 % 58.76 % ORF
75. retro_vvin_134 66.83 % 64.86 % ORF
76. retro_vvin_145 80.45 % 65.20 % ORF
77. retro_vvin_146 83.65 % 60.74 % ORF
78. retro_vvin_147 68.48 % 58.99 % ORF
79. retro_vvin_149 85.94 % 70.33 % ORF
80. retro_vvin_150 82.07 % 56.25 % ORF
81. retro_vvin_154 84.12 % 57.14 % ORF
82. retro_vvin_165 78.29 % 56.09 % ORF
83. retro_vvin_167 88.21 % 60.12 % ORF
84. retro_vvin_168 65.67 % 67.68 % ORF
85. retro_vvin_169 50.48 % 53.30 % ORF
86. retro_vvin_170 85.37 % 50.94 % ORF
87. retro_vvin_171 76.56 % 70.33 % ORF
88. retro_vvin_174 77.40 % 52.16 % ORF
89. retro_vvin_175 79.26 % 100.00 % ORF
90. retro_vvin_177 86.79 % 71.92 % ORF
91. retro_vvin_181 75.00 % 50.88 % ORF
92. retro_vvin_182 75.00 % 70.33 % ORF
93. retro_vvin_183 73.44 % 70.33 % ORF
94. retro_vvin_184 69.90 % 67.76 % ORF
95. retro_vvin_192 74.36 % 73.91 % ORF
96. retro_vvin_194 75.00 % 70.33 % ORF
97. retro_vvin_195 75.00 % 70.33 % ORF
98. retro_vvin_196 79.69 % 70.33 % ORF
99. retro_vvin_197 79.69 % 70.33 % ORF
# Ensembl ID Symbol Description
1. VIT_09s0002g03480
2. VIT_18s0001g12300
3. VIT_00s0179g00190
4. VIT_08s0105g00510
5. VIT_01s0010g03370
6. VIT_10s0003g04830
7. VIT_05s0049g00210
8. VIT_05s0020g02210 AHP1
9. VIT_18s0001g00210
10. VIT_05s0020g04620
11. VIT_03s0038g03650
12. VIT_05s0020g04110
13. VIT_14s0081g00140
14. VIT_14s0068g01460
15. VIT_04s0023g00140
16. VIT_12s0057g00800
17. VIT_13s0084g00820
18. VIT_14s0036g00730
19. VIT_07s0197g00010
20. VIT_12s0059g00750
21. VIT_02s0087g00650
22. VIT_17s0000g08460 Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:D7SHR5]
23. VIT_11s0103g00250
24. VIT_14s0083g01100 RGP3
25. VIT_12s0028g02020
26. VIT_03s0017g02260
27. VIT_14s0108g00740
28. VIT_03s0038g03420
29. VIT_06s0009g02410
30. VIT_05s0124g00280
31. VIT_05s0062g01190
32. VIT_19s0085g00730
33. VIT_05s0124g00560
34. VIT_01s0011g06250
35. VIT_18s0089g00900 ATWHY2
36. VIT_10s0003g02790
37. VIT_04s0008g02290 AIP2
38. VIT_02s0012g00100
39. VIT_07s0005g00690
40. VIT_11s0206g00130
41. VIT_08s0058g00780
42. VIT_06s0004g02480
43. VIT_02s0033g01110
44. VIT_10s0116g00760
45. VIT_03s0180g00170
46. VIT_03s0038g03690
47. VIT_06s0009g03170
48. VIT_04s0008g00770 SHM3
49. VIT_11s0016g04200
50. VIT_13s0019g03270
51. VIT_02s0025g00640
52. VIT_02s0012g01770
53. VIT_15s0046g01510
54. VIT_03s0091g00410
55. VIT_14s0060g00600
56. VIT_04s0023g03360
57. VIT_17s0000g08710
58. VIT_14s0068g01370
59. VIT_07s0141g00830
60. VIT_14s0066g02280
61. VIT_10s0003g00530
62. VIT_08s0007g03950
63. VIT_07s0005g04750
64. VIT_07s0005g06490
65. VIT_05s0077g02320
66. VIT_02s0154g00500
67. VIT_13s0067g00420
68. VIT_03s0038g00910
69. VIT_04s0023g01310
70. VIT_04s0023g00600
71. VIT_19s0014g03450
72. VIT_04s0023g01280
73. VIT_11s0037g01120
74. VIT_05s0020g02560
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)