Parental gene: | Al_scaffold_0001_2882 |
| Aliases: | None |
| Description: | Tetratricopeptide repeat (TPR)-like superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G28020) TAIR;Acc:AT1G28020] |
| Organism: | Lyre-leaved rock-cress (Arabidopsis lyrata) |
| Coordinates: | 1:12298013..12313321(-) |
>Al_scaffold_0001_2882
ATGGTATCATCTGTCCCATTTGTTTATCGGAATATGCTAGCAAAGAGACTGTACGGTGCATACCAGAATGTGATCACTGT
TTCCACGTTGAATCATCGTATCACGGATGCTCTCCATCGGAATGCACAAATCATTCCAGTGCTAGAGCAATGGCGGCAGC
AGGGTAATCAAGTGAACCCTTCGCACGTGAGAGTCATCATAAAAAAGCTTCGTGATTCCGACCAATCTCTCCAAGCCCTT
CAGGTATCAGAGTGGATGAGTAAAGAAAAGATTTGCAATCTAATCCCAGAAGATTTTGCAGCTCGGCTTCATCTGATAGA
GAATGTTGTAGGTTTAGAAGAAGCAGAGAAGTTCTTCGAAAGTATTCCAAAGAACGCAAGAGACGATTCTGTTTACACCA
CTCTCTTAAACTGGTATGCAAGATCAGACAAAACTCTGTGTAAAGCCGAAGCCACGTTCCAGAAGATGAGGGAGTTAGGT
CTCCTCTCGAGACCTTCTCCTTACAACGCAATGATGTCTCTCTACATTGCACTAAATGATCGAGAAAAAGTGGAAGAGCT
TTTGCGTGAGATGAAAGATAATGACGTGGAGGCCGATAGTATCACAGTAAACAACGTGTTGAAGCTATACTCGGCTGTGT
GTGACGTGACCGCGATGGAGAAGTTTTTGAATAAGTGGGAAGGGATTAATGGGATCAAACTTGAGTGGCTTACGACTCTT
GACATGGCAAAGGCTTACCTGCGAGCCCGTTCAAATGGAAAGGCTATCAAAATGCTGCGTTTAACAGAGGAATTGGCGGA
TCGTAAGTCGCTAAAATCAGCTTACGACCATCTCATGAAGCTGTATGGTGAAGCTGGAAACAGAGAAGAGGTTTTACGTA
TATGGAACCTTTACAAGATGAACATAGGACAACGTGATAACAAGGGTTACCGAACTGTGATCCGTTCTCTCTTGAAGGTA
GACGATATTTTTGGGGCAGAAGAGATATACAAAGTGTGGGAATCGTTGTCACTTGAGTTTGATATCCGAATCCCGACTAT
GTTGGCCTCTGGTTATCGAGAGAGAGGAATGACAGAGAAGGCTGAGAAACTCATAAACAGTAAAACCATTAAGGACAGAA
AAATGAATAAGCCCGTCACTCCGCTTTTGGAGCAATGGGGAGATCAAATGAAACCGTCTGATCTTAAATGCCTTATCAAG
AATCTCCGTGATTCCAATCAGTTTTCTAAAGCACTTCAGGTTTCCGAATGGATGGGTGAAAAACGGGTTTGTGATCTTTA
TTCGGAAGATTATGCAGCTAGGCTTTACCTGACTGAGAATGTGTTGGGTTTGGAAAAAGCAGAGAAGTACTTTGAAAACA
TCCCTGAGAACATGAAGGATTACTCTGTCTACGTAGCTCTCTTAAGCTCTTACGCGAAATCTGACAAAAATTTGGAAAAT
ATGGTGGAGGAGATTCTTCGTGAGATGGAGGAGAACAACGTGGATCCTGATAGTATCACGGTGAACTATGTTTTAAAGGT
ATACGCGGCTGCATCAAAGGTAGAAGCAATGGAAATGTTTATGAGACATTGGGCGGTAGAGATGTATGGTAATGTGGCAG
GTTGTAAAAGAGAGGTGCACAATCTTTGGGAAGAATGTAAGAATAAGAAGGAAGAAAAAGTGGGGGATGGTAAGGAATGT
TTAAATGTGGTTAGCACTTTGTTGAAGATGGACGATGATGGATATCGAACTGTGATTAGCTCTTTGTTGAAGCTGGATGA
TGTACAAGGAGCAGAGAAGGTATATGGAGAGTGGAAACCGAAGGGACCGAAAGAAGGGAATGCATTGAAGGTTGGGGAAA
TGTTAAAGTCGATTAGTAAGAAGAGGAATGTGATGCATTTAAGGATGTTGAAGGAATTTGTAGTCAGCGTCTTGATATGT
GTTGCCGTTTTTGTGGGCGTCTTATGTTTACTGCTCCTAGACTATTGGGCCTGCCCATACCGATATCACCGCTACTACTA
CTAA
ATGGTATCATCTGTCCCATTTGTTTATCGGAATATGCTAGCAAAGAGACTGTACGGTGCATACCAGAATGTGATCACTGT
TTCCACGTTGAATCATCGTATCACGGATGCTCTCCATCGGAATGCACAAATCATTCCAGTGCTAGAGCAATGGCGGCAGC
AGGGTAATCAAGTGAACCCTTCGCACGTGAGAGTCATCATAAAAAAGCTTCGTGATTCCGACCAATCTCTCCAAGCCCTT
CAGGTATCAGAGTGGATGAGTAAAGAAAAGATTTGCAATCTAATCCCAGAAGATTTTGCAGCTCGGCTTCATCTGATAGA
GAATGTTGTAGGTTTAGAAGAAGCAGAGAAGTTCTTCGAAAGTATTCCAAAGAACGCAAGAGACGATTCTGTTTACACCA
CTCTCTTAAACTGGTATGCAAGATCAGACAAAACTCTGTGTAAAGCCGAAGCCACGTTCCAGAAGATGAGGGAGTTAGGT
CTCCTCTCGAGACCTTCTCCTTACAACGCAATGATGTCTCTCTACATTGCACTAAATGATCGAGAAAAAGTGGAAGAGCT
TTTGCGTGAGATGAAAGATAATGACGTGGAGGCCGATAGTATCACAGTAAACAACGTGTTGAAGCTATACTCGGCTGTGT
GTGACGTGACCGCGATGGAGAAGTTTTTGAATAAGTGGGAAGGGATTAATGGGATCAAACTTGAGTGGCTTACGACTCTT
GACATGGCAAAGGCTTACCTGCGAGCCCGTTCAAATGGAAAGGCTATCAAAATGCTGCGTTTAACAGAGGAATTGGCGGA
TCGTAAGTCGCTAAAATCAGCTTACGACCATCTCATGAAGCTGTATGGTGAAGCTGGAAACAGAGAAGAGGTTTTACGTA
TATGGAACCTTTACAAGATGAACATAGGACAACGTGATAACAAGGGTTACCGAACTGTGATCCGTTCTCTCTTGAAGGTA
GACGATATTTTTGGGGCAGAAGAGATATACAAAGTGTGGGAATCGTTGTCACTTGAGTTTGATATCCGAATCCCGACTAT
GTTGGCCTCTGGTTATCGAGAGAGAGGAATGACAGAGAAGGCTGAGAAACTCATAAACAGTAAAACCATTAAGGACAGAA
AAATGAATAAGCCCGTCACTCCGCTTTTGGAGCAATGGGGAGATCAAATGAAACCGTCTGATCTTAAATGCCTTATCAAG
AATCTCCGTGATTCCAATCAGTTTTCTAAAGCACTTCAGGTTTCCGAATGGATGGGTGAAAAACGGGTTTGTGATCTTTA
TTCGGAAGATTATGCAGCTAGGCTTTACCTGACTGAGAATGTGTTGGGTTTGGAAAAAGCAGAGAAGTACTTTGAAAACA
TCCCTGAGAACATGAAGGATTACTCTGTCTACGTAGCTCTCTTAAGCTCTTACGCGAAATCTGACAAAAATTTGGAAAAT
ATGGTGGAGGAGATTCTTCGTGAGATGGAGGAGAACAACGTGGATCCTGATAGTATCACGGTGAACTATGTTTTAAAGGT
ATACGCGGCTGCATCAAAGGTAGAAGCAATGGAAATGTTTATGAGACATTGGGCGGTAGAGATGTATGGTAATGTGGCAG
GTTGTAAAAGAGAGGTGCACAATCTTTGGGAAGAATGTAAGAATAAGAAGGAAGAAAAAGTGGGGGATGGTAAGGAATGT
TTAAATGTGGTTAGCACTTTGTTGAAGATGGACGATGATGGATATCGAACTGTGATTAGCTCTTTGTTGAAGCTGGATGA
TGTACAAGGAGCAGAGAAGGTATATGGAGAGTGGAAACCGAAGGGACCGAAAGAAGGGAATGCATTGAAGGTTGGGGAAA
TGTTAAAGTCGATTAGTAAGAAGAGGAATGTGATGCATTTAAGGATGTTGAAGGAATTTGTAGTCAGCGTCTTGATATGT
GTTGCCGTTTTTGTGGGCGTCTTATGTTTACTGCTCCTAGACTATTGGGCCTGCCCATACCGATATCACCGCTACTACTA
CTAA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_alyr_9 | 54.80 | 73.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Al_scaffold_0001_2882 retrocopies