Parental gene:

RABGGTB, ENSACAG00000011052

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343194.1:3342088..3350409(+)


>ENSACAG00000011052
CTTGTGGGTCATCCTGCAGCACGTTTTGCTATAGGAACACCACAAAAAGATGTCATAATAAAAAATGATGCACCAGCTAC
ATTGTTCTTAGAAAAGCATGCAGACTACATAGCTGCTTATGGAACGAAGAAAGATGATTATGAATACTGTATGTCAGAAT
ATTTAAGAATGAGTGGCGTTTATTGGGGATTGACAGTAATGGATCTTATGGGACAGCTGCATCGTATGAGCAAAGAAGAA
ATTCTGGAATTTATTAAATCATGTCAACATGAATGTGGGGGAATAAGTGCCAGCATAGGTCATGATCCTCACCTTTTATA
TACCCTTAGTGCTGTCCAGATTCTAACTCTTTATGACAGTCTCCAGGTTGTTGATGTAAATAAGATTGTAGAATATGTGA
AGAAGCTGCAAAAGGAGGATGGATCATTTGCTGGAGATAAATGGGGAGAAGTAGATACAAGGTTTTCTTTTTGTGCAGTT
GCAACATTAGCCCTTCTGGGCAAACTGGATGCCATTGATGTGGACAAAGCAGTAGCATTTGTATTGTCCTGTATGAACTT
TGATGGAGGGTTTGGTTGTAGACCAGGATCTGAATCTCATGCAGGACAGATCTATTGTTGCACAGGATTTCTGGCCATAA
CTGGCCAGCTGCATCAAATTAATGCTGATCTACTAGGCTGGTGGCTTTGTGAACGTCAGTTACCATCTGGAGGGCTAAAT
GGAAGGCCAGAGAAGTTGCCAGATGTATGCTATTCCTGGTGGGTGCTGGCATCTTTGAAGATAATTGGCAGGTTGCATTG
GATTGACAGAGAGAAATTGTGCAGCTTTATTTTGGCCTGTCAGGATGAGGAGACTGGAGGATTTGCTGACAGGCCAGGAG
ATATGGTGGATCCATTTCACACCTTGTTTGGAATTGCTGGACTATCATTATTGGGAGAAGAACAAATCAAGCCAGTAAAT
CCTGTGTTTTGTATGCCTGAAGAGATCCTTCGAAGAGTAAATGTACAACCAGAACTTGTGAGCTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 45 .56 RPM
SRP009831_brain 69 .87 RPM
SRP009831_dewlap 117 .07 RPM
SRP009831_embryo 119 .44 RPM
SRP009831_heart 27 .03 RPM
SRP009831_liver 24 .99 RPM
SRP009831_lung 20 .75 RPM
SRP009831_ovary 102 .00 RPM
SRP009831_skeletal_muscle 20 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000020392 ortholog_one2one 1 retrogene
retro_cfam_2104,
Choloepus hoffmanni ENSCHOG00000009456 ortholog_one2one 2 retrogenes
retro_chof_1851, retro_chof_260,
Mus musculus ENSMUSG00000038975 ortholog_one2one 1 retrogene
retro_mmus_1030,
Otolemur garnettii ENSOGAG00000007665 ortholog_one2one 1 retrogene
retro_ogar_1089,
Sorex araneus ENSSARG00000007392 ortholog_one2one 1 retrogene
retro_sara_207,
Ictidomys tridecemlineatus ENSSTOG00000021824 ortholog_one2one 1 retrogene
retro_itri_484,
Tursiops truncatus ENSTTRG00000014126 ortholog_one2one 3 retrogenes
retro_ttru_1391, retro_ttru_1767, retro_ttru_214,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_155 96.35 56.30
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Download FASTA sequences of all ENSACAG00000011052 retrocopies