Parental gene:

UBFD1, ENSACAG00000029331

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL344033.1:74598..90514(-)


>ENSACAG00000029331
AGGATTAAAGAGAGTTCAAAATCCGCATGCTGTTTAGAAAAGCAACACAGGAAAGTATTAGATAAAGGCAAACCGGATGA
CGTGATGCCTTCTGTCAAAGGTGTCCAGGAACGACTGCCAACTGTCCCTTTATCGGGCATGTACAACAAGTCTGGCGGAA
AAGTCCGGCTCACTTTCAAACTCGAACAGGATCAGCTCTGGATTGGCACGAAAGAAAGGACAGAAAAGTTGCCAATGGGG
TCCATCAAGAACGTGGTGAGCGAACCCATTGAAGGACATGAGGATTATCACATGATGGCCTTCCAGCTGGGGCCGACGGA
AGCCTCCTACTACTGGGTCTACTGGGTCCCCACCCAATACGTGGACGCCATCAAGGACACGGTGCTGGGCAAGTGGCAGT
TCTTTTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 7 .48 RPM
SRP009831_brain 5 .68 RPM
SRP009831_dewlap 66 .44 RPM
SRP009831_embryo 7 .68 RPM
SRP009831_heart 14 .27 RPM
SRP009831_liver 8 .47 RPM
SRP009831_lung 14 .51 RPM
SRP009831_ovary 79 .11 RPM
SRP009831_skeletal_muscle 32 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017670 ortholog_one2one 1 retrogene
retro_cfam_1952,
Callithrix jacchus ENSCJAG00000020614 ortholog_one2many 1 retrogene
retro_cjac_372,
Cavia porcellus ENSCPOG00000006872 ortholog_one2one 2 retrogenes
retro_cpor_292, retro_cpor_635,
Monodelphis domestica ENSMODG00000006727 ortholog_one2one 2 retrogenes
retro_mdom_1162, retro_mdom_1298,
Oryctolagus cuniculus ENSOCUG00000008444 ortholog_one2one 1 retrogene
retro_ocun_666,
Pongo abelii ENSPPYG00000007191 ortholog_one2one 1 retrogene
retro_pabe_2528,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_106 93.42 56.30
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2. retro_acar_204 92.86 62.22
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Download FASTA sequences of all ENSACAG00000029331 retrocopies