Parental gene:

UBFD1, ENSPPYG00000007191

Aliases:None
Description:ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565]
Organism:Orangutan (Pongo abelii)
Coordinates:16:22703600..22720840(+)


>ENSPPYG00000007191
ATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACCGTGGCGACTGAGGCTCC
CGCGCGGCCCCTCAACTGCCTGGAGGCTGAAGCCGCGGCGGGGGCGGCGGCCGAGGACTCTGGCACCGCACGAGGCAGCC
TGCAGCCGGCCCCGGCCCAGCCCCCTGGGGACCCCGCAGCCCAGGCCTCGGTCAGCAACGGCGAAGACGCGGGCGGCGGC
GCGGGCAGGGAGCTGGTGGACTTGAAGATCATCTGGAACAAGACCAAGCATGACGTGAAGTTCCCCCTGGACAGCACAGG
CTCCGAGCTTAAACAGAAGATCCACTCGATTACAGGTCTCCCGCCTGCCATGCAGAAAGTCATGTATAAGGGACTCGTCC
CCGAGGATAAAACATTGAGAGAAATAAAAGTGACCAGTGGGGCCAAGATCATGGTGGTTGGCTCCACCATCAATGATGTT
TTAGCAGTAAACACACCCAAAGATGCTGCGCAGCAGGATGCAAAGGCGGAAGAGAACAAGAAGGAGCCTCTCTGCAGGCA
GAAACAACACAGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCATCTGTTAAGGGTGCCCAGGAGCGCCTGC
CAACGGTACCGCTGTCTGGCATGTACAATAAATCTGGAGGAAAAGTGAGACTCACCTTTAAACTAGAACAAGACCAGCTG
TGGATTGGCACTAAAGAGCGGACTGAGAAATTGCCCATGGGCTCCATAAAAAATGTGGTCAGTGAACCTATCGAAGGACA
TGAAGACTACCACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAAT
ATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGTATTTTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 68 .51 RPM
SRP007412_cerebellum 73 .08 RPM
SRP007412_heart 28 .45 RPM
SRP007412_kidney 44 .02 RPM
SRP007412_liver 31 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000029331 ortholog_one2one 2 retrogenes
retro_acar_106, retro_acar_204,
Canis familiaris ENSCAFG00000017670 ortholog_one2one 1 retrogene
retro_cfam_1952,
Monodelphis domestica ENSMODG00000006727 ortholog_one2one 2 retrogenes
retro_mdom_1162, retro_mdom_1298,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2528 88.26 74.11
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Download FASTA sequences of all ENSPPYG00000007191 retrocopies