Parental gene: | UBFD1, ENSPPYG00000007191 |
| Aliases: | None |
| Description: | ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 16:22703600..22720840(+) |
>ENSPPYG00000007191
ATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACCGTGGCGACTGAGGCTCC
CGCGCGGCCCCTCAACTGCCTGGAGGCTGAAGCCGCGGCGGGGGCGGCGGCCGAGGACTCTGGCACCGCACGAGGCAGCC
TGCAGCCGGCCCCGGCCCAGCCCCCTGGGGACCCCGCAGCCCAGGCCTCGGTCAGCAACGGCGAAGACGCGGGCGGCGGC
GCGGGCAGGGAGCTGGTGGACTTGAAGATCATCTGGAACAAGACCAAGCATGACGTGAAGTTCCCCCTGGACAGCACAGG
CTCCGAGCTTAAACAGAAGATCCACTCGATTACAGGTCTCCCGCCTGCCATGCAGAAAGTCATGTATAAGGGACTCGTCC
CCGAGGATAAAACATTGAGAGAAATAAAAGTGACCAGTGGGGCCAAGATCATGGTGGTTGGCTCCACCATCAATGATGTT
TTAGCAGTAAACACACCCAAAGATGCTGCGCAGCAGGATGCAAAGGCGGAAGAGAACAAGAAGGAGCCTCTCTGCAGGCA
GAAACAACACAGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCATCTGTTAAGGGTGCCCAGGAGCGCCTGC
CAACGGTACCGCTGTCTGGCATGTACAATAAATCTGGAGGAAAAGTGAGACTCACCTTTAAACTAGAACAAGACCAGCTG
TGGATTGGCACTAAAGAGCGGACTGAGAAATTGCCCATGGGCTCCATAAAAAATGTGGTCAGTGAACCTATCGAAGGACA
TGAAGACTACCACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAAT
ATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGTATTTTTGA
ATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACCGTGGCGACTGAGGCTCC
CGCGCGGCCCCTCAACTGCCTGGAGGCTGAAGCCGCGGCGGGGGCGGCGGCCGAGGACTCTGGCACCGCACGAGGCAGCC
TGCAGCCGGCCCCGGCCCAGCCCCCTGGGGACCCCGCAGCCCAGGCCTCGGTCAGCAACGGCGAAGACGCGGGCGGCGGC
GCGGGCAGGGAGCTGGTGGACTTGAAGATCATCTGGAACAAGACCAAGCATGACGTGAAGTTCCCCCTGGACAGCACAGG
CTCCGAGCTTAAACAGAAGATCCACTCGATTACAGGTCTCCCGCCTGCCATGCAGAAAGTCATGTATAAGGGACTCGTCC
CCGAGGATAAAACATTGAGAGAAATAAAAGTGACCAGTGGGGCCAAGATCATGGTGGTTGGCTCCACCATCAATGATGTT
TTAGCAGTAAACACACCCAAAGATGCTGCGCAGCAGGATGCAAAGGCGGAAGAGAACAAGAAGGAGCCTCTCTGCAGGCA
GAAACAACACAGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCATCTGTTAAGGGTGCCCAGGAGCGCCTGC
CAACGGTACCGCTGTCTGGCATGTACAATAAATCTGGAGGAAAAGTGAGACTCACCTTTAAACTAGAACAAGACCAGCTG
TGGATTGGCACTAAAGAGCGGACTGAGAAATTGCCCATGGGCTCCATAAAAAATGTGGTCAGTGAACCTATCGAAGGACA
TGAAGACTACCACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAAT
ATGTGGATGCAATCAAAGACACTGTGCTGGGGAAATGGCAGTATTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 68 .51 RPM |
| SRP007412_cerebellum | 73 .08 RPM |
| SRP007412_heart | 28 .45 RPM |
| SRP007412_kidney | 44 .02 RPM |
| SRP007412_liver | 31 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000029331 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000017670 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006727 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2528 | 88.26 | 74.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007191 retrocopies