Parental gene:

RPS10, ENSAMEG00000001047

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192386.1:2164167..2170029(+)


>ENSAMEG00000001047
ATGTTGATGCCCAAGAAGAACCGAATTGCCATTTATGAACTCCTTTTCAAGGAGGGGGTGATGGTGGCCAAGAAGGATGT
CCACATGCCCAAACACCCTGAGCTGGCAGACAAGAATGTGCCCAACCTTCACGTCATGAAGGCCATGCAGTCTCTCAAAT
CACGAGGCTACGTAAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTATCTTACCAACGAGGGTATCCAGTATCTCCGT
GATTACCTCCACCTGCCCCCCGAAATTGTGCCTGCCACCCTGCGCCGCAGCCGCCCTGAGACTGGCAGACCACGGCCCAA
AGGTCTGGAGGGAGAGCGACCTGCAAGACTCACACGAGGGGAAGCTGACAGAGACGCCTACAGACGAAGCGCTGTGCCCC
CTGGTGCCGACAAGAAAGCTGAGGCCGGGGCTGGGTCAGCAACTGAGTTCCAGTTTAGAGGCGGATTTGGTCGTGGACGT
GGTCAGCCACCTCAGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001214 ortholog_one2one 2 retrogenes
retro_cfam_1, retro_cfam_92,
Callithrix jacchus ENSCJAG00000015250 possible_ortholog 4 retrogenes
retro_cjac_215, retro_cjac_296, retro_cjac_325, retro_cjac_63,
Felis catus ENSFCAG00000015355 ortholog_one2one 3 retrogenes
retro_fcat_1443, retro_fcat_1681, retro_fcat_1757,
Latimeria chalumnae ENSLACG00000017219 ortholog_one2one 1 retrogene
retro_lcha_26,
Loxodonta africana ENSLAFG00000008539 ortholog_one2one 1 retrogene
retro_lafr_756,
Macaca mulatta ENSMMUG00000000267 ortholog_one2one 2 retrogenes
retro_mmul_332, retro_mmul_555,
Monodelphis domestica ENSMODG00000013929 ortholog_one2one 2 retrogenes
retro_mdom_1889, retro_mdom_437,
Mustela putorius furo ENSMPUG00000003117 ortholog_one2one 3 retrogenes
retro_mputfur_1347, retro_mputfur_1533, retro_mputfur_1579,
Mus musculus ENSMUSG00000052146 possible_ortholog 9 retrogenes
retro_mmus_1376, retro_mmus_1500, retro_mmus_1831, retro_mmus_2431, retro_mmus_2551, retro_mmus_2708, retro_mmus_3651, retro_mmus_5, retro_mmus_858,
Otolemur garnettii ENSOGAG00000001365 ortholog_one2one 5 retrogenes
retro_ogar_2166, retro_ogar_2314, retro_ogar_2553, retro_ogar_415, retro_ogar_873,
Pongo abelii ENSPPYG00000016516 possible_ortholog 2 retrogenes
retro_pabe_2319, retro_pabe_97,
Rattus norvegicus ENSRNOG00000000490 possible_ortholog 4 retrogenes
retro_rnor_169, retro_rnor_224, retro_rnor_359, retro_rnor_74,
Sarcophilus harrisii ENSSHAG00000000731 ortholog_one2one 3 retrogenes
retro_shar_243, retro_shar_334, retro_shar_724,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_446 73.94 99.39
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2. retro_amel_890 71.60 97.58
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3. retro_amel_1408 60.12 98.79
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4. retro_amel_1706 66.27 100.00
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Download FASTA sequences of all ENSAMEG00000001047 retrocopies