Parental gene:

NT5C3, ENSAMEG00000006624

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192869.1:1030708..1045001(+)


>ENSAMEG00000006624
ATGCCTAATCAGGATTCTGCTGTACATGTGAAAATGATGCCTGAATTCCAGAGAAGTTCAGTTCGAATCAAGAACCCTGC
AAGAGTAGAAGAAATTATCTGTGGTCTTATTAAGGGAGGAGCTCCCAAACTTCAGATAATAACAGACTTTGATATGACAC
TGAGTAGATTTTCCTATGAAGGGAAAAGATGCCCAACATGTCATTATGTCATTGACAGCAGTAAGCTGGTTACAGATGAA
TGTCGAAAAAAGTTACTGCAACTAAAGGAAAAATATTATGCCATTGAAATTGACCCTGGTCTTACCATGGAAGAGAAGTA
CCCCTATATGGTAGAATGGTATACTAAATCACATGGTTTGCTTGTTGAACAAGCTTTACCAAAAGCTAAACTTAAAGAAA
TTGTGGCAGAATCTGATGTTATGCTCAAGGAAGGGTATGAGAATTTCTTTGATAAGCTCCAACAATACGGTATCCCTGTG
TTCATATTTTCGGCTGGTATTGGTGATATACTAGAGGAGGTAATCCACCAAGCTGGCGTTTATCACCCAAACATCACAGT
AGTGTCCAACTTCATGGATTTTGATGACAATGGAGTGCTGAAAGGATTTAAAGGCGAACTAATTCATGTATTTAACAAAC
ATGATGGTGCCTTGAAGAACACAGAATATTTCAATCGACTAAAAGACAATAGCAACATCATTCTTCTGGGAGATTCCCAA
GGGGACACAAGAATGGCAGATGGAGTGGCCAACATTGAACACATCCTGAAAATTGGATATCTAAATGATAGAGTAGATGA
GCTTTTAGAAAAGTACATGGACTTTTACGACATTGTTCTGGTAAAAGACGAATCATTGGATGTAGCCAACTCTATCTTAC
AGAAGATTCTATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005754 within_species_paralog 1 retrogene
retro_amel_1542,
Bos taurus ENSBTAG00000016709 ortholog_one2one 1 retrogene
retro_btau_1465,
Canis familiaris ENSCAFG00000003154 ortholog_one2one 1 retrogene
retro_cfam_1295,
Equus caballus ENSECAG00000011777 ortholog_one2one 1 retrogene
retro_ecab_1118,
Homo sapiens ENSG00000122643 ortholog_one2one 1 retrogene
retro_hsap_3084,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Rattus norvegicus ENSRNOG00000005981 ortholog_one2one 1 retrogene
retro_rnor_632,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_875 62.94 55.89
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Download FASTA sequences of all ENSAMEG00000006624 retrocopies