Parental gene:

SLBP, ENSBTAG00000001328

Aliases:None
Description:histone RNA hairpin-binding protein [Source:RefSeq peptide;Acc:NP_001039345]
Organism:Cow (Bos taurus)
Coordinates:6:109613822..109629337(-)


>ENSBTAG00000001328
ATGGCCTACAGGCCGCGAAGCCCCGCCGCCTACGAGAACCGTCGCGACAGCGACGCCAGCCCTCCGCCCCCCGCGCGTTG
GAGCCTCGGACGCAAGCGCACGGCCGACGGGAGGCGCCGGAAGCCCGAAGACGCCGAGGGCCTCGCAAGGCCGCCCAGCG
GTCACAGACCCGAGAGCTTTACCACTCCCGAAGGCCCCAAGCCCCGTTCCAGATGCTCCGACTGGGCGAGTGCAGTGGAA
GAAGATGAAATGAGGACCAGCGTCAACAAAGAAATCGCAAGATATAAAAGGAAACTCCTCATCAATGACTTTGGAAGAGA
GAGAAAGTCATCATCAGGAAGTTCGGATTCGAAGGAGTCTGTGTCTGCGTTACCAGCCGACTTGGAGACGGATGAAAGTG
TCCTGATGCGGAGACAGAAGCAGATCAACTATGGGAAGAACACCATCGCCTACGACCGCTACATTAAAGAAGTCCCCAGG
CACCTTCGACAGCCCGGCGTTCATCCCAAAACCCCCAACAAATTCAAGAAGTACAGTCGGCGGTCGTGGGACCAGCAGAT
CAGACTCTGGAAGGTGGCTCTGCATTTTTGGGATCCCCCCGCTGAAGAAGGATGCGATTTGCAAGAAATACATCCTGTGG
ACCTCGGGGAGATGGAGACTGAGTCTGCAGAAAGCAGCTCTGAGTCCCAGACGAGCTCTCAGGACAACTTCGACATGTTC
TGCGGCACCCCCACTAAAGTCAGGCACGTGGACCACCAGGCGGAGGACGAGTTCGATTTGGAGGCCTGTTTAACCGAGCC
CCTGAGAGACTTCTCAGCCATGAGCTAA

Library Parental gene expression (RPM)
ERP005899_liver 12 .47 RPM
ERP005899_muscle 24 .60 RPM
SRP017611_brain 23 .89 RPM
SRP017611_kidney 15 .00 RPM
SRP017611_liver 8 .83 RPM
SRP030211_testis 58 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000000031 ortholog_one2one 1 retrogene
retro_cpor_364,
Mus musculus ENSMUSG00000004642 ortholog_one2one 1 retrogene
retro_mmus_1169,
Otolemur garnettii ENSOGAG00000009750 ortholog_one2one 1 retrogene
retro_ogar_1463,
Pteropus vampyrus ENSPVAG00000002807 ortholog_one2one 2 retrogenes
retro_pvam_490, retro_pvam_941,
Rattus norvegicus ENSRNOG00000037162 ortholog_one2one 2 retrogenes
retro_rnor_1864, retro_rnor_2016,
Tarsius syrichta ENSTSYG00000000376 ortholog_one2one 2 retrogenes
retro_tsyr_1595, retro_tsyr_482,
Tursiops truncatus ENSTTRG00000010901 ortholog_one2many 1 retrogene
retro_ttru_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1456 71.53 51.64
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Download FASTA sequences of all ENSBTAG00000001328 retrocopies