Parental gene:

SLBP, ENSPVAG00000002807

Aliases:None
Description:stem-loop binding protein [Source:HGNC Symbol;Acc:10904]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_2678:5186..14360(-)


>ENSPVAG00000002807
ATGGCCTGCCGCCCGCGAAGCCCCCCCCGGGACGGGAGCCGCCGCGACCGCGACGCCAGCCCGCCGTTCCCAAGTAGATG
GAGCCTCGGGCGCCAGCGCAGAGCCGAAGGTATGTGCACGACTGTCGAGGACACCTTCACCACGCCCGAAGGCCCGAAGC
CCCGCTCCCGATGTGCGGACTGGGCGAGCGCGGTCGAGGAGGACGAGATGCGGAGCCGCGTTAACAAGGAAATCGCCAGA
TATAAAAGAAAACTCCTCATAAACGACTTTGGAAGAGAGAGAAAATCATCATCAGGAAGTTCTGACTCGAAGGAGTCTGC
GTCTGCAGTGCCCGCCGACCTGGAGACGGACGAGGGCGTCCTGATGAGGAGGCAGAAGCAGATCAGCTACGGGAAGAACA
CCCTCGCCTACGACCGCTACATCAAAGCCGTCCCGAGACACCTTCGACAACCTGGCATTCATCCCAAGACCCCCAACAAA
TTCAAGAAGTACAGCCGACGGTCGTGGGACCAGCAGATCAAACTCTGGAAGGTGGCTCTGCATTTTTGGGATCCTCCAGC
TGAAGAAGGATGTGATTTCCAAGAAATACACCCCGTGGACCTCGGGGAGATGGAGACCGAGGCCGCAGAGAGCAGCTCCG
GGTCCCAGAGCAGCTCCCAGGAAAACCTTGATGTGTTCTCTGGCACACCCACCAAAGTTAGACACGTGGACTGCCAAGCA
GAGGACGAGTTCGACTTGGAAGCTTGTTTAACTGAACCCTTGAAGGACTTCTCGGCCATGAGCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001328 ortholog_one2one 1 retrogene
retro_btau_1456,
Cavia porcellus ENSCPOG00000000031 ortholog_one2one 1 retrogene
retro_cpor_364,
Mus musculus ENSMUSG00000004642 ortholog_one2one 1 retrogene
retro_mmus_1169,
Otolemur garnettii ENSOGAG00000009750 ortholog_one2one 1 retrogene
retro_ogar_1463,
Rattus norvegicus ENSRNOG00000037162 ortholog_one2one 2 retrogenes
retro_rnor_1864, retro_rnor_2016,
Tarsius syrichta ENSTSYG00000000376 ortholog_one2one 2 retrogenes
retro_tsyr_1595, retro_tsyr_482,
Tursiops truncatus ENSTTRG00000010901 ortholog_one2many 1 retrogene
retro_ttru_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_490 50.84 67.43
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2. retro_pvam_941 67.79 56.70
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Download FASTA sequences of all ENSPVAG00000002807 retrocopies