Parental gene:

SAP30L, ENSBTAG00000004000

Aliases:None
Description:histone deacetylase complex subunit SAP30L [Source:RefSeq peptide;Acc:NP_001178301]
Organism:Cow (Bos taurus)
Coordinates:7:67737281..67745532(-)


>ENSBTAG00000004000
ATGAACGGCTTTAGCACCGAGGAGGACAGCCGCGAAGGGCCCCCCGCCGCCCCCGCCGCCGCCCCGGGCTACGGCCAGAG
CTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCCGCGGGCAACGCCTCCTTCAGCAAGAGAGTCCAGAAGAGCA
TCTCGCAGAAGAAACTCAAGCTGGACATCGACAAGAGCGTAAGGCATCTGTATATTTGCGATTTCCACAAAAATTTCATC
CAGAGTGTACGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGCGGAGATTCTCCTGAGCATGACACTGACATTCCTGA
GGTTGATCTGTTCCAGCTGCAGGTGAACACTCTCCGACGTTATAAACGACACTACAAATTGCAGACCAGACCAGGCTTCA
ATAAGGCCCAGTTAGCAGAAACTGTCAGCCGACACTTCAGGAACATACCTGTGAATGAAAAGGAGACCCTCGCTTACTTC
ATCTACATGGTGAAGAGTAACAAGAGTAGACTGGACCAGAAGTCAGAGAGTGGCAAACAGCTTGAGTGA

Library Parental gene expression (RPM)
ERP005899_liver 5 .05 RPM
ERP005899_muscle 7 .71 RPM
SRP017611_brain 6 .26 RPM
SRP017611_kidney 10 .02 RPM
SRP017611_liver 5 .51 RPM
SRP030211_testis 20 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016695 ortholog_one2one 1 retrogene
retro_amel_588,
Canis familiaris ENSCAFG00000017642 ortholog_one2one 1 retrogene
retro_cfam_2138,
Felis catus ENSFCAG00000014985 ortholog_one2one 1 retrogene
retro_fcat_1968,
Mustela putorius furo ENSMPUG00000013575 ortholog_one2one 1 retrogene
retro_mputfur_955,
Ochotona princeps ENSOPRG00000014552 ortholog_one2one 2 retrogenes
retro_opri_176, retro_opri_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1024 78.38 100.00
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Download FASTA sequences of all ENSBTAG00000004000 retrocopies