Parental gene:

SAP30L, ENSCAFG00000017642

Aliases:None
Description:SAP30-like [Source:HGNC Symbol;Acc:25663]
Organism:Dog (Canis familiaris)
Coordinates:4:55253040..55261575(-)


>ENSCAFG00000017642
ATGAACGGCTTCAGCACGGAGGAGGACAGCCGCGAAGGGCCCCCCGCCGCCCCGGCCGCCCCGGGCTACGGCCAGAGCTG
CTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCCGCGGGCAACGCCTCCTTCAGCAAGAGGGTCCAGAAGAGCATCT
CGCAGAAGAAACTCAAGCTGGACATCGACAAGAGCGTAAGGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAG
AGTGTACGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGTGGAGATTCTCCTGAGCACGACACTGACATTCCTGAGGT
TGATCTGTTCCAGCTGCAGGTGAACACTCTACGGCGTTATAAACGACACTACAAATTGCAGACCAGACCAGGCTTCAATA
AGGCCCAGTTAGCAGAAACTGTCAGCCGACACTTCAGGAACATACCTGTGAATGAAAAAGAGACGCTTGCCTACTTCATC
TACATGGTGAAGAGTAACAAGAGTAGACTGGACCAGAAATCGGAGGGTGGCAAACAGCTTGAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 4 .54 RPM
SRP017611_brain 3 .81 RPM
SRP017611_kidney 4 .36 RPM
SRP017611_liver 5 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016695 ortholog_one2one 1 retrogene
retro_amel_588,
Bos taurus ENSBTAG00000004000 ortholog_one2one 1 retrogene
retro_btau_1024,
Felis catus ENSFCAG00000014985 ortholog_one2one 1 retrogene
retro_fcat_1968,
Mustela putorius furo ENSMPUG00000013575 ortholog_one2one 1 retrogene
retro_mputfur_955,
Ochotona princeps ENSOPRG00000014552 ortholog_one2one 2 retrogenes
retro_opri_176, retro_opri_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2138 66.35 56.91
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Download FASTA sequences of all ENSCAFG00000017642 retrocopies