Parental gene:

TUBB5, ENSBTAG00000006969

Aliases:TUBB, TUBB2A, TUBB2B, TUBB5
Description:Tubulin beta-5 chain [Source:UniProtKB/Swiss-Prot;Acc:Q2KJD0]
Organism:Cow (Bos taurus)
Coordinates:23:28101726..28105320(-)


>ENSBTAG00000006969
ATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGCAATCAGATCGGTGCCAAGTTCTGGGAGGTGATCAGTGATGA
ACATGGCATCGACCCCACCGGCACCTATCATGGGGACAGCGACCTACAACTGGACCGCATCTCCGTGTACTACAATGAAG
CCACAGGTGGCAAATATGTCCCTCGTGCTATCTTGGTGGATCTAGAACCCGGAACCATGGACTCTGTTCGCTCAGGTCCT
TTTGGTCAGATCTTCAGACCAGACAACTTTGTTTTTGGTCAGTCCGGGGCAGGCAACAACTGGGCCAAGGGCCACTATAC
AGAGGGAGCCGAGCTGGTTGACTCGGTCCTGGATGTGGTTCGGAAGGAGGCCGAGAGCTGTGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCGCTGGGTGGGGGCACTGGCTCCGGAATGGGCACCTTGCTCATCAGCAAGATCCGTGAAGAGTATCCC
GACCGCATCATGAACACCTTCAGCGTGGTGCCCTCACCCAAAGTTTCCGACACTGTGGTTGAGCCCTACAACGCCACCCT
CTCTGTCCATCAGCTGGTGGAGAACACTGATGAAACCTACTGCATTGACAACGAGGCCCTTTACGACATATGTTTCCGCA
CCCTCAAGCTGACCACACCAACCTATGGAGACCTGAACCACCTCGTCTCGGCCACCATGAGTGGAGTCACCACTTGCCTC
CGCTTTCCTGGCCAGCTCAATGCTGACCTCCGCAAGCTGGCCGTCAACATGGTGCCCTTCCCACGCCTCCACTTCTTCAT
GCCTGGCTTTGCCCCTCTTACCAGCCGTGGCAGCCAGCAGTATCGGGCCCTCACTGTCCCTGAGCTCACCCAGCAGGTCT
TCGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGGTACCTCACCGTGGCTGCTGTGTTCCGTGGGCGG
ATGTCCATGAAGGAGGTAGATGAGCAGATGCTCAACGTGCAGAATAAGAACAGCAGCTACTTCGTGGAATGGATCCCCAA
CAACGTCAAGACAGCTGTTTGCGACATCCCACCCCGTGGTCTGAAGATGGCAGTCACCTTCATTGGCAACAGCACAGCCA
TCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACGGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGT
GAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCCGAGTACCAGCAGTACCAGGA
TGCCACCGCAGAAGAGGAAGAGGATTTCGGTGAGGAGGCCGAAGAGGAGGCCTAA

Library Parental gene expression (RPM)
ERP005899_liver 12 .18 RPM
ERP005899_muscle 410 .54 RPM
SRP017611_brain 159 .56 RPM
SRP017611_kidney 103 .07 RPM
SRP017611_liver 51 .35 RPM
SRP030211_testis 59 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000443 ortholog_one2one 1 retrogene
retro_cfam_1860,
Echinops telfairi ENSETEG00000013572 possible_ortholog 1 retrogene
retro_etel_641,
Macaca mulatta ENSMMUG00000023684 possible_ortholog 2 retrogenes
retro_mmul_2501, retro_mmul_375,
Mustela putorius furo ENSMPUG00000011690 ortholog_one2one 3 retrogenes
retro_mputfur_1123, retro_mputfur_607, retro_mputfur_807,
Nomascus leucogenys ENSNLEG00000005348 possible_ortholog 1 retrogene
retro_nleu_498,
Otolemur garnettii ENSOGAG00000032213 ortholog_one2one 1 retrogene
retro_ogar_2391,
Pongo abelii ENSPPYG00000016419 possible_ortholog 4 retrogenes
retro_pabe_2920, retro_pabe_3210, retro_pabe_3698, retro_pabe_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_55 95.72 100.00
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2. retro_btau_471 90.36 100.00
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Download FASTA sequences of all ENSBTAG00000006969 retrocopies