Parental gene:

NUDT21, ENSBTAG00000010207

Aliases:None
Description:Cleavage and polyadenylation specificity factor subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZCA2]
Organism:Cow (Bos taurus)
Coordinates:18:24267848..24282456(+)


>ENSBTAG00000010207
ATGTCCGTGGTGCCGCCCAATCGCTCGCAGACCGGCTGGCCCCGGGGAGTCACCCAGTTCGGCAACAAGTATATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATCAACCTGTACCCTCTTACCAATTACACTTTTGGTACAAAAGAACCCCTCT
ATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAAATTGGCATGAGGAGGACTGTA
GAAGGGGTTTTGATTGTCCATGAGCACCGGCTACCCCATGTGTTACTGCTACAGCTGGGAACAACGTTCTTCAAATTACC
TGGTGGTGAGCTTAATCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATATTGGGTCGTCAAGATG
GAGTCCTGCAAGACTGGGTTATCGATGACTGCATTGGCAACTGGTGGAGACCAAATTTTGAGCCTCCTCAGTATCCATAT
ATTCCTGCACATATTACAAAACCTAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCGCTATTTGAACTGTATGACAATGCACCTGGATATGGACCCATCATTTCTA
GTCTCCCCCAGCTTTTGAGCAGGTTCAATTTTATATACAACTGA

Library Parental gene expression (RPM)
ERP005899_liver 6 .49 RPM
ERP005899_muscle 18 .69 RPM
SRP017611_brain 14 .30 RPM
SRP017611_kidney 21 .46 RPM
SRP017611_liver 6 .87 RPM
SRP030211_testis 27 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012724 ortholog_one2one 3 retrogenes
retro_cjac_1121, retro_cjac_2211, retro_cjac_4100,
Loxodonta africana ENSLAFG00000028465 possible_ortholog 1 retrogene
retro_lafr_610,
Mustela putorius furo ENSMPUG00000003451 possible_ortholog 1 retrogene
retro_mputfur_158,
Nomascus leucogenys ENSNLEG00000001963 ortholog_one2one 2 retrogenes
retro_nleu_1477, retro_nleu_2493,
Oryctolagus cuniculus ENSOCUG00000017224 possible_ortholog 2 retrogenes
retro_ocun_154, retro_ocun_87,
Sorex araneus ENSSARG00000006493 ortholog_one2one 2 retrogenes
retro_sara_161, retro_sara_580,
Sus scrofa ENSSSCG00000029848 possible_ortholog 2 retrogenes
retro_sscr_117, retro_sscr_185,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_937 88.70 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_btau_1655 95.24 55.51
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000010207 retrocopies