Parental gene:

BLOC1S1, ENSBTAG00000011918

Aliases:None
Description:Biogenesis of lysosome-related organelles complex 1 subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2NKW0]
Organism:Cow (Bos taurus)
Coordinates:5:57863516..57866922(-)


>ENSBTAG00000011918
ATGCTGTCCCGCCTGCTGAAAGAACACCAGGCCAAGCAGAATGAACGCAAAGAGCTTCAGGAGAAGAGAAGGCGAGAGGC
CATCACTGCAGCGACCTGCCTGACAGAAGCTTTGGTCGATCACCTCAATGTAGGTGTGGCCCAGGCCTACATGAACCAGA
GGAAGCTTGACCATGAGGTGAAGACCCTGCAGGTCCAGGCAGCCCAGTTTGCCAAGCAGACAGGCCAGTGGATCGGGATG
GTGGAGAACTTCAACCAGGCACTCAAGGAAATTGGGGATGTGGAGAACTGGGCTCGGAGCATCGAGCTGGACATGCGCAC
CATTGCCACCGCGCTGGAGTACGTCTACAAAGGGCAGCTGCAGTCGGCCCCCTCCTAG

Library Parental gene expression (RPM)
ERP005899_liver 13 .84 RPM
ERP005899_muscle 31 .62 RPM
SRP017611_brain 17 .95 RPM
SRP017611_kidney 26 .26 RPM
SRP017611_liver 24 .84 RPM
SRP030211_testis 13 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008026 ortholog_one2many 1 retrogene
retro_cjac_148,
Cavia porcellus ENSCPOG00000001818 ortholog_one2one 2 retrogenes
retro_cpor_1260, retro_cpor_846,
Macropus eugenii ENSMEUG00000001570 ortholog_one2many 3 retrogenes
retro_meug_12, retro_meug_1307, retro_meug_242,
Oryctolagus cuniculus ENSOCUG00000010114 ortholog_one2one 1 retrogene
retro_ocun_1023,
Pteropus vampyrus ENSPVAG00000017748 ortholog_one2one 1 retrogene
retro_pvam_121,
Sus scrofa ENSSSCG00000000359 ortholog_one2one 1 retrogene
retro_sscr_850,
Ictidomys tridecemlineatus ENSSTOG00000010338 ortholog_one2one 1 retrogene
retro_itri_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_878 72.80 100.00
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Download FASTA sequences of all ENSBTAG00000011918 retrocopies