Parental gene:

FAM96B, ENSBTAG00000013931

Aliases:None
Description:mitotic spindle-associated MMXD complex subunit MIP18 [Source:RefSeq peptide;Acc:NP_001179967]
Organism:Cow (Bos taurus)
Coordinates:18:34754939..34756799(-)


>ENSBTAG00000013931
ATGGTGGGCGGCGGCGGCATGGGGGGCGGTCTCCTGGAGAACGCTAACCCCCTCATCTACGAGCGCTCTGGGGACCGGCC
AGTGTCCGCGGGCGAGGAGGACGAGCAGGTTCCAGACAGCATCGACGCGCGCGAGATCTTCGATTTGATTCGCTCCATCA
ATGACCCGGAGCATCCCCTGACGCTAGAAGAATTGAACGTAGTAGAGCAAGTCCGGGTTCAGGTGAGCGACCCCGAGAGC
ACAGTGGCTGTGGCCTTCACACCCACCATTCCACACTGCAGTATGGCCACCCTTATTGGCCTGTCCATCAAAGTCAAGCT
TCTTCGATCCCTTCCCCAGCGTTTCAAGATGGATGTGCACATTACACCAGGGACCCATGCCTCAGAACATGCAGTGAACA
AGCAGCTTGCAGATAAAGAGCGGGTGGCAGCTGCCCTAGAGAACACCCACCTGCTTGAGGTTGTGAACCAGTGTCTGTCA
GCCCGGTCTTGA

Library Parental gene expression (RPM)
SRP017611_brain 12 .38 RPM
SRP017611_kidney 19 .92 RPM
SRP017611_liver 9 .51 RPM
ERP005899_muscle 26 .13 RPM
ERP005899_liver 5 .62 RPM
SRP030211_testis 23 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017164 ortholog_one2one 1 retrogene
retro_amel_1340,
Bos taurus ENSBTAG00000002012 within_species_paralog 2 retrogenes
retro_btau_509, retro_btau_984,
Canis familiaris ENSCAFG00000020394 ortholog_one2one 2 retrogenes
retro_cfam_479, retro_cfam_802,
Felis catus ENSFCAG00000029216 ortholog_one2one 2 retrogenes
retro_fcat_1464, retro_fcat_697,
Mustela putorius furo ENSMPUG00000005303 ortholog_one2one 2 retrogenes
retro_mputfur_1547, retro_mputfur_302,
Mus musculus ENSMUSG00000031879 ortholog_one2one 1 retrogene
retro_mmus_2927,
Sarcophilus harrisii ENSSHAG00000004698 ortholog_one2one 1 retrogene
retro_shar_590,
Tarsius syrichta ENSTSYG00000005006 ortholog_one2one 2 retrogenes
retro_tsyr_1305, retro_tsyr_149,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_609 58.25 63.19
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Download FASTA sequences of all ENSBTAG00000013931 retrocopies