Parental gene:

ARMC1, ENSBTAG00000015901

Aliases:None
Description:Armadillo repeat-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZBE1]
Organism:Cow (Bos taurus)
Coordinates:14:31695683..31720448(-)


>ENSBTAG00000015901
ATGAATTCGTCGTCCTCCACCATGAATGAGGAACCTGATGCTCTCTCTGTAGTTAACCAGCTCCGAGACCTAGCCGCAGA
TCCTTTAAACCGACGAGCCATTGTCCAGGATCAGGGATGTCTGCCCGGCCTTATTTTATTTATGGACCATCCCAACCCCC
CTGTTGTCCATTCAGCTTTGCTCGCTCTTCGATACTTGGCAGAGTGCCGTGCCAACCGAGAAAAGATGAAAGGAGAGCTG
GGAATGATGTTAAGCTTGCAAAATGTTATACAGAAGTCTACAACTCCAGGGGAAACAAAACTGCTAGCCTCTGAAATCTA
TGACATTCTTCAATCTTCCAATATGGCAGATGGGGATAGTTTCAATGAAATGAATTCACGTCGAAGGAAAGCTCAGTTTT
TTCTGGGAACTACAAACAAACGTGCCAAAACAGTGGTTTTGCATATAGATGGTCTTGATGATACGTCCCGGAGAAACCTG
TGTGAAGAGGCCTTGTTAAAAATTAAAGGCGTTATTAGCTTTACTTTTCAAATGGCTGTTCAGAGATGTGTGGTGCGAAT
CCGTTCAGATCTTAAAGCAGAGGCTTTGGCATCAGCAATAGCATCAACCAAGGTTATGAAGGCTCAGCAAGTTGTGAAGA
GTGAAAGTGGAGAAGAGATGCTGGTCCCATTCCAGGACACGCCTGTGGAGGTAGAACAGAACACGGAGCTGCCTGACTAC
CTGCCTGAGGATGAGAGTCCCACGAAAGAGCAGGACAAGGCGGTGTCCCGGGTGGGCTCCCACCCGGAGGGTGGAGCTAG
CTGGCTGAGCACAGCTGCAAACTTTTTATCCAGGTCATTCTACTGGTGA

Library Parental gene expression (RPM)
ERP005899_liver 21 .34 RPM
ERP005899_muscle 23 .60 RPM
SRP017611_brain 54 .59 RPM
SRP017611_kidney 33 .67 RPM
SRP017611_liver 16 .76 RPM
SRP030211_testis 23 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000104442 ortholog_one2one 1 retrogene
retro_hsap_3100,
Gorilla gorilla ENSGGOG00000022803 ortholog_one2one 1 retrogene
retro_ggor_2129,
Myotis lucifugus ENSMLUG00000014037 ortholog_one2one 1 retrogene
retro_mluc_2058,
Nomascus leucogenys ENSNLEG00000003916 ortholog_one2one 1 retrogene
retro_nleu_1518,
Oryctolagus cuniculus ENSOCUG00000000392 ortholog_one2one 2 retrogenes
retro_ocun_1437, retro_ocun_782,
Pongo abelii ENSPPYG00000018630 ortholog_one2one 1 retrogene
retro_pabe_2474,
Pan troglodytes ENSPTRG00000020298 ortholog_one2one 1 retrogene
retro_ptro_2096,
Sus scrofa ENSSSCG00000006220 ortholog_one2one 1 retrogene
retro_sscr_1027,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1447 84.16 71.28
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Download FASTA sequences of all ENSBTAG00000015901 retrocopies