Parental gene:

ARMC1, ENSPPYG00000018630

Aliases:None
Description:armadillo repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_001125221]
Organism:Orangutan (Pongo abelii)
Coordinates:8:67768159..67793611(-)


>ENSPPYG00000018630
ATGAATTCTTCCACTTCCACCATGAGTGAAGAGCCTGATGCTCTATCGGTAGTTAACCAGTTACGGGATCTAGCAGCAGA
TCCGTTAAACAGAAGAGCCATCGTCCAGGATCAGGGATGTCTGCCTGGCCTTATTTTATTTATGGACCATCCCAACCCTC
CAGTCGTCCACTCTGCTTTGCTTGCTCTTCGATACTTGGCAGAATGCCGTGCAAACAGAGAAAAGATGAAAGGAGAACTG
GGTATGATGTTGAGCTTACAAAATGTTATACAGAAAACTACAACTCCAGGAGAAACAAAACTTCTGGCCTCTGAAATCTA
TGACATTCTTCAGTCCTCCAATATGGCAGATGGTGATAGTTTTAATGAGATGAATTCACGTCGAAGGAAAGCTCAGTTTT
TTCTGGGAACTACAAACAAACGTGCCAAAACAGTGGTTTTGCATATAGATGGCCTTGATGATACGTCTCGGAGAAATCTA
TGTGAAGAGGCTTTGTTAAAAATTAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTTCAAAGGTGTGTGGTGCGAAT
CCGTTCAGATTTGAAAGCTGAGGCTTTGGCATCAGCAATAGCATCAACCAAGGTTATGAAAGCTCAGCAAGTTGTGAAAA
GTGAAAGTGGAGAAGAGTTATCCAGATCATTTTGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .92 RPM
SRP007412_cerebellum 6 .20 RPM
SRP007412_heart 1 .72 RPM
SRP007412_kidney 1 .92 RPM
SRP007412_liver 1 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015901 ortholog_one2one 1 retrogene
retro_btau_1447,
Homo sapiens ENSG00000104442 ortholog_one2one 1 retrogene
retro_hsap_3100,
Gorilla gorilla ENSGGOG00000022803 ortholog_one2one 1 retrogene
retro_ggor_2129,
Myotis lucifugus ENSMLUG00000014037 ortholog_one2one 1 retrogene
retro_mluc_2058,
Nomascus leucogenys ENSNLEG00000003916 ortholog_one2one 1 retrogene
retro_nleu_1518,
Oryctolagus cuniculus ENSOCUG00000000392 ortholog_one2one 2 retrogenes
retro_ocun_1437, retro_ocun_782,
Pan troglodytes ENSPTRG00000020298 ortholog_one2one 1 retrogene
retro_ptro_2096,
Sus scrofa ENSSSCG00000006220 ortholog_one2one 1 retrogene
retro_sscr_1027,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2474 75.68 65.33
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Download FASTA sequences of all ENSPPYG00000018630 retrocopies