Parental gene:

BT.28437, ENSBTAG00000017483

Aliases:None
Description:serpin B6 [Source:RefSeq peptide;Acc:NP_777214]
Organism:Cow (Bos taurus)
Coordinates:23:50515221..50529891(-)


>ENSBTAG00000017483
ATGGATGCGCTGTCAGAAGCAAACGGCACCTTCGCCTTGACCCTTCTGAAAAAGCTGGGTGAGGGCAGCTCGGAAAATGT
GTTTATCTCGCCCCTAAGCATCTCCTCTGCCCTGGCCATGGTCCTCATGGGAGCCAGGGGCAACACCGCAGCCCAGATGT
GCCAGACGCTTTCTCTAAACAAGAGCAGTGGGGGAGGTGAAGATGTCCACCAGGGTTTCCAGAACCTTCTCAGCGAAGTT
AATAGGACGGACACACAGTACTTGCTCAGAACCGCCAACAGGCTTTTTGGAGAGAAGACTTACGATTTCCTCTCGTCTTT
CAAAGATTCCTGCCGCATATTCTACCAAGCAGAGATGGAAGAGCTGGACTTTCTCAGCGCTACGGAGGAGTCCAGGAAGC
ACATAAATACCTGGGTAGCCGAAAAGACAGAAGGTAAAATTAGAGACTTGCTCCCTGCAAATTCAGTTAACGCCATGACA
CGTCTCGTTCTCGTGAATGCCATCTACTTCAAAGGGAACTGGGACACACAGTTTAACAAAGAGCACACCAAGGAAAGGCC
TTTCAGAGTCAGCAAGAACATGGAGAAACCTGTGCAAATGATGTTCAAGAAGTCCACCTTTAAATCAACCTACATTGGAG
AAATAAGCACCCAGATTCTGGTGCTTCCCTACGTAGGCAAAGAACTGAACATGGTCATCCTGCTGCCCAGTGAGAGCACA
GACTTGAACACGGTGGAGAAGGCCCTGACCTATGAGAAATTCGTCACTTGGACGAAGCTGGATGTGATGGACGAGGACGA
GGTGGAGGTGTTCCTGCCCCGCTTCACGCTGGAGGAGAGTTACGACATGGAGTGCGTCCTCCGAGACCTGGGCGTGACCG
ACGCCTTCGAGGCGGCCCAGGCTGACTTCAGCGGGATGTCGTGCCAGCAAGACTTGCATCTGTCCAAGATCGTGCACAAG
TCCTTCGTGGAGGTCACTGAAGAGGGCACAGAGGCCGCAGCCGCCACAGTGGCCAGGATCACCCCGAGAATCCTGAGGAT
CGTGCCCCGGTTCTGTGCCGACCACCCCTTCCTCTTCTTCATCCAGCACAGCAGGACCGGGGCCATCCTGTTCTGCGGCC
GCTTCTGCTCGCCGTGA

Library Parental gene expression (RPM)
ERP005899_liver 0 .29 RPM
ERP005899_muscle 6 .39 RPM
SRP017611_brain 0 .37 RPM
SRP017611_kidney 2 .07 RPM
SRP017611_liver 0 .60 RPM
SRP030211_testis 22 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000012630 possible_ortholog 1 retrogene
retro_etel_1134,
Microcebus murinus ENSMICG00000001981 ortholog_one2many 1 retrogene
retro_mmur_403,
Myotis lucifugus ENSMLUG00000008803 ortholog_one2many 1 retrogene
retro_mluc_1610,
Monodelphis domestica ENSMODG00000005468 ortholog_many2many 2 retrogenes
retro_mdom_510, retro_mdom_602,
Mustela putorius furo ENSMPUG00000000448 ortholog_one2many 1 retrogene
retro_mputfur_1037,
Mus musculus ENSMUSG00000060147 ortholog_many2many 2 retrogenes
retro_mmus_3191, retro_mmus_3192,
Pteropus vampyrus ENSPVAG00000010001 ortholog_one2many 1 retrogene
retro_pvam_1243,
Tursiops truncatus ENSTTRG00000003879 ortholog_one2many 2 retrogenes
retro_ttru_1224, retro_ttru_1837,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_827 52.74 62.17
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Download FASTA sequences of all ENSBTAG00000017483 retrocopies