Parental gene:

EIF3H, ENSCAFG00000000816

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit H [Source:HGNC Symbol;Acc:3273]
Organism:Dog (Canis familiaris)
Coordinates:13:16103877..16209720(-)


>ENSCAFG00000000816
ATGGTAGTTAATTGTTTCCCTATTCATTCTCTTGATGATTTTAACCTCTCAGTTCTAAAAGTCCAGTATCAGATGGAAAT
GATGCGCAGCCTTCGCCATGTCAACATTGATCACCTCCACGTGGGCTGGTATCAGTCCACGTACTATGGCTCGTTCGTCA
CCCGAGCACTCCTGGATTCTCAGTTCAGTTACCAGCATGCCATTGAAGAATCTGTCGTTCTCATTTACGATCCCATAAAA
ACTGCCCAAGGGTCCCTCTCGCTGAAAGCATACAGACTGACTCCTAAACTGATGGAAGTTTGTAAAGAGAAGGATTTTTC
TCCTGAAGCATTGAAAAAGGGAAATATCACCTTTGAGCACATGTTTGAAGAAGTGCCGATTGTAATTAAAAACTCACATC
TGATCAACGTCCTAATGTGGGAGCTTGAGAAGAAGTCAGCTGTAGCAGATAAACATGAATTGCTCAGTCTTGCTAGCAGC
AATCATTTGGGGAAGAATCTACAGTTGCTGATGGACAGAGTGGATGAAATGAGCCAAGATATAGTTAAATATAACACATA
CATGAGGAACACGAGTAAACAACAGCAGCAGAAACATCAGTATCAGCAGCGTCGCCAGCAGGAGAATATGCAGCGCCAGA
GTCGGGGAGAACCCCCACTGCCTGAGGAGGATCTGTCCAAACTTTTCAAACCACCTCAGCCTCCTGCCAGGATGGATTCT
CTACTCATTGCAGGCCAGATTAACACTTACTGCCAGAATATCAAGGAGTTCACTGCCCAAAACTTGGGCAAACTCTTCAT
GGCCCAGGCTCTTCAGGAATACAACAACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 95 .80 RPM
SRP017611_brain 49 .14 RPM
SRP017611_kidney 182 .79 RPM
SRP017611_liver 49 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005910 ortholog_one2many 1 retrogene
retro_cjac_3023,
Echinops telfairi ENSETEG00000000324 ortholog_one2many 1 retrogene
retro_etel_24,
Macropus eugenii ENSMEUG00000015663 ortholog_one2many 4 retrogenes
retro_meug_1223, retro_meug_1244, retro_meug_1790, retro_meug_376,
Monodelphis domestica ENSMODG00000004154 ortholog_one2one 1 retrogene
retro_mdom_1243,
Mus musculus ENSMUSG00000022312 ortholog_one2one 1 retrogene
retro_mmus_1668,
Oryctolagus cuniculus ENSOCUG00000007534 ortholog_one2one 1 retrogene
retro_ocun_608,
Otolemur garnettii ENSOGAG00000008905 ortholog_one2one 1 retrogene
retro_ogar_2043,
Sorex araneus ENSSARG00000009067 ortholog_one2one 1 retrogene
retro_sara_69,
Sarcophilus harrisii ENSSHAG00000014977 ortholog_one2one 1 retrogene
retro_shar_561,
Ictidomys tridecemlineatus ENSSTOG00000001403 ortholog_one2one 1 retrogene
retro_itri_420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2073 91.76 93.37
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Download FASTA sequences of all ENSCAFG00000000816 retrocopies