Parental gene:

ENSCAFG00000004696

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:2:21715332..21749597(-)


>ENSCAFG00000004696
ATGGCGGCGGCCGGGGCCGAGGCGCGACGAGCTTGGTGTGTGCCTTGCCTAGTTTCACTTGATACTCTTCAGGAATTATG
TAGAAAAGAAAAACTCACATGTAAATCGATTGGAATCACCAAAAGGAATCTAAACAATTATGAGGTGGAATACTTGTGTG
ACTACAAGGTAGTAAAGGATATGGAATATTATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAATACTTGGGAACCT
TTGCAAAATCTCAAGTGCCCATTACTACTTCAGCAGTTCTCTAATGACAAGCATAATTATTTATCTCAGGTAAAGAAAGG
CAAAGCAATATCTCTAAAAGACAATAACAAAGCTCTGAAACCTGCCATTGCTGAATACATTGTAAAGAAGGCTAAACAGA
GGATAGCTCTGCAGAGATGGCAAGATGAACTCAACAGAAGAAAGAATCATAAAGGAATGATTTTTGTTGAAAATACTGTT
GACTTAGAGGGCCCACCTTCAGACTTCTACTATATTAATGAATACAAACCAGCTCCTGGAATCAGCTTAGTCAATGAAGC
TACCTTTGGTTGTTCATGTACAGATTGCTTCTTTGAGAAATGTTGTCCTGCTGAAGCTGGAGTTCTTTTGGCTTATAATA
AAAACCAGCAAATTAAAATCCCACCTGGTACCCCCATTTATGAATGCAACTCGAGGTGTCAATGTGGACCCGATTGTCCC
AATAGGATTGTACAAAAAGGCACCCAGTATTCACTTTGCATCTTTCGAACTAGTAATGGCTGTGGCTGGGGTGTAAAAAC
CCTTGTGAAGATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGTAATCACAAGCGAAGAAGCTGAAAGACGGG
GACAATTATATGACAACAAGGGAATCACATATCTCTTTGATCTGGATTATGAATCTGATGAATTCACAGTGGATGCAGCC
CGATATGGAAATGTCTCTCATTTTGTTAATCACAGTTGTGACCCAAATCTTCAGGTGTTCAATGTTTTCATTGACAACCT
TGATACCCGTCTTCCCCGAATAGCATTATTTTCCACAAGAACTATAAATGCTGGAGAAGAGCTCACTTTTGATTATCAAA
TGAAAGGTTCTGGAGATATATCTTCAGATTCTGTTGACCACAGCCCAGCCAAAAAGAGGGTCAGAACTGTGTGCAAGTGT
GGAGCTGTGACTTGCAGAGGGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 6 .34 RPM
SRP017611_brain 6 .19 RPM
SRP017611_kidney 9 .11 RPM
SRP017611_liver 2 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008492 ortholog_one2many 1 retrogene
retro_cpor_1546,
Homo sapiens ENSG00000152455 ortholog_one2many 1 retrogene
retro_hsap_3482,
Gorilla gorilla ENSGGOG00000028243 ortholog_one2many 1 retrogene
retro_ggor_2348,
Microcebus murinus ENSMICG00000002803 ortholog_one2many 1 retrogene
retro_mmur_340,
Nomascus leucogenys ENSNLEG00000012108 ortholog_one2many 1 retrogene
retro_nleu_2202,
Oryctolagus cuniculus ENSOCUG00000015090 ortholog_one2many 1 retrogene
retro_ocun_1408,
Ochotona princeps ENSOPRG00000009465 ortholog_one2many 1 retrogene
retro_opri_1005,
Pongo abelii ENSPPYG00000002106 ortholog_one2many 1 retrogene
retro_pabe_2877,
Tupaia belangeri ENSTBEG00000006477 ortholog_one2many 4 retrogenes
retro_tbel_2646, retro_tbel_3572, retro_tbel_852, retro_tbel_993,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_574 89.33 61.67
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Download FASTA sequences of all ENSCAFG00000004696 retrocopies