Parental gene:

DDX18, ENSCAFG00000004950

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741]
Organism:Dog (Canis familiaris)
Coordinates:19:32016255..32031133(-)


>ENSCAFG00000004950
ATGTCCCATCTACCCATGAAACTCCTGCGCAAGAAGATAGAGAAACGGAATCTCAAGTTGCGCCAGCGAAACCTGAAGCT
CCGGGGGGCCTCGGATGTGAGCTTATCAGAAACACAAAATGGAGATGTGTCTGAAGAAACAGTGGGAGGTGGGAAGGTTA
AAAAATCTCTAAAACAGTCTGTGAACATGGGCTCGTCAGAAGCCCAGAATGGAGAGGTAGCTAAAAAAACAGTGGAAACT
GTACAAATTAGAAAGAAAAAAAAGAAATCTACCATAATAGTCAATGGAGAAGCAGAAACACAGCCTCCCAATTCAGAATC
AAAAAAAAAGAAGAAGAGAAAGAGAAAAATGGTGGATGATGCTGGGCCTGATACCAAAAAATCAAAAACTGAAGACAAAG
GGGACTCTGAAGAAGGGACCCAGGCTCCTGAAGAGACAGAAAACAATGGGGAGAAGCCAGATGATGAGGAAGAGGACAGT
GAAGTGCCCAGCCTACCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCATTTGCTTCTCTTTCTAGTCTTGTTAATGA
GAACACTCTGAAGGCAATAAAAGAAATGGGTTTTACAAACATGACTGAAATTCAGCATAAAAGTATCAGACCACTTCTGG
AAGGCAGGGATCTACTAGCGGCTGCAAAAACAGGCAGTGGCAAAACGCTGGCATTTCTCATCCCTGCAGTCGAACTCATT
GTCAAGTTAAAGTTCATGCCTAGGAATGGAACAGGAGTTCTTATTCTCTCACCTACTAGGGAACTGGCCATGCAGACTTT
TGGTGTTCTTAAAGAGCTAATGATGTACCATGTTCACACATACGGGTTAATAATGGGTGGCAGCAACAGATCTGCTGAAG
CACAGAAACTTGGTAACGGGATCAACATCATTGTGGCCACCCCAGGCCGTCTCCTGGACCACATGCAGAATACCCCAGGG
TTTATGTATAAAAATCTACAGTGTCTGGTTATTGATGAGGCTGATCGTATCTTGGATGTTGGGTTTGAAGAGGAATTAAA
ACAAATTATTAAACTTCTGCCAACACGCAGGCAAACCATGCTCTTTTCTGCCACACAAACTCGAAAAGTTGAAGACTTAG
CAAGGATTTCTTTGAAAAAGGAGCCATTGTATGTTGGTGTTGATGACGATAAAGCTAATGCGACAGTGGATGGTCTTGAG
CAGGGATATGTTGTTTGTCCCTCAGAAAAGAGGTTCCTTCTGCTCTTTACATTCCTTAAGAAGAACCGGAAGAAGAAGCT
GATGGTCTTCTTTTCATCCTGTAAGTCCGTGAAATACCACTATGAGTTGCTGAACTACATCGATTTGCCTGTCTTGGCCA
TTCATGGAAGGCAGAAGCAAAATAAGCGTACAACCACATTCTTCCAGTTCTGCAATGCTGATTCGGGGATATTGTTGTGT
ACAGACGTGGCAGCTAGAGGGCTGGATATTCCTGAAGTTGACTGGATTGTTCAGTATGACCCTCCAGATGACCCCAAGGA
ATATATTCATCGTGTGGGAAGAACAGCCAGAGGCCTAAACGGAAGAGGTCACGCCTTGCTCATCTTACACCCTGAAGAGT
TGGGTTTCCTTCGTTACCTGAAGCAATCCAAGGTTCCATTAAGTGAATTTGAATTTTCCTGGTCCAAGATTTCTGACATT
CAGTCTCAGCTTGAAAAATTGATTGAAAAGAACTACTTCCTTCATAAGTCAGCGCAGGAGGCATATAAGTCCTACATTCG
AGCATATGATTCCCATTCTCTGAAACAGATCTTCAATGTTAATAACTTAAATTTGCCTCAAGTTGCTCTGTCGTTTGGTT
TCAAGGTGCCTCCTTTTGTTGATCTGAATGTGAACAGCAACGACGGCAAACTTAAAAAGAGAGGAGGTGGTGGCGGCTTC
GGATACCAGAAAGCCAAGAAAGTTGAGAAGTCCAAAATCTTCAAACACATTAGCAGGAAGTCCTCTGACAGCCGGCAGTT
CTCCCAC

Library Parental gene expression (RPM)
SRP012049_cerebellum 48 .68 RPM
SRP017611_brain 40 .73 RPM
SRP017611_kidney 31 .57 RPM
SRP017611_liver 12 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021414 possible_ortholog 5 retrogenes
retro_cjac_2309, retro_cjac_2743, retro_cjac_4179, retro_cjac_644, retro_cjac_753,
Gorilla gorilla ENSGGOG00000028420 possible_ortholog 4 retrogenes
retro_ggor_1201, retro_ggor_2189, retro_ggor_2402, retro_ggor_535,
Myotis lucifugus ENSMLUG00000017607 ortholog_one2one 1 retrogene
retro_mluc_2279,
Macaca mulatta ENSMMUG00000021343 possible_ortholog 1 retrogene
retro_mmul_2192,
Monodelphis domestica ENSMODG00000000533 ortholog_one2one 1 retrogene
retro_mdom_414,
Mus musculus ENSMUSG00000001674 ortholog_one2one 1 retrogene
retro_mmus_2865,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1404 89.23 86.70
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2. retro_cfam_2116 85.48 63.38
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Download FASTA sequences of all ENSCAFG00000004950 retrocopies