Parental gene:

ENSCAFG00000005339

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:15:16990906..16996474(-)


>ENSCAFG00000005339
AGCAGGAGCCCGACCCCGCCGAGCCCCGCCGCCCTGGCGCGCCGCCCGCAGGAGCCGCTGATGCCCGATGAGGTCCACCA
GAACCAGATCCTGCGAGAGGTGTATCTCAAGGAGCTTCGAACCCAGAAACTCTCCACAGAGTATCACGTGAATCCCCTCC
GCAAGGTTCACACAATCACCAGAAAGCCCATGTCTTGGCACGAGAACCTGGAGGAACCTGCAGATGCCAGGTTCCTCAAT
CTTATCCACCATGCCGCTCAGGGGCCACGGAAGAAATACCCAGACACGCAAACAGAAAGCCAAGAAATTGGATGGGACTC
TGAGCCCTTGGTCAGCCCGGAACGTGATGACCGCAGGCTGAACCATTTCAGGGTGCACAGCGACATCACACTCTACAAGG
CTAAAGTGTGGAGCTTGGGAGAAGATGATCGCCACACATAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .80 RPM
SRP017611_brain 0 .16 RPM
SRP017611_kidney 0 .07 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003315 ortholog_many2many 1 retrogene
retro_cjac_323,
Homo sapiens ENSG00000186973 ortholog_many2many 1 retrogene
retro_hsap_1,
Gorilla gorilla ENSGGOG00000010892 ortholog_many2many 2 retrogenes
retro_ggor_1704, retro_ggor_69,
Nomascus leucogenys ENSNLEG00000013230 ortholog_one2many 3 retrogenes
retro_nleu_147, retro_nleu_2537, retro_nleu_2865,
Pongo abelii ENSPPYG00000001457 ortholog_many2many 1 retrogene
retro_pabe_48,
Pan troglodytes ENSPTRG00000000624 ortholog_many2many 1 retrogene
retro_ptro_22,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_671 86.81 62.33
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Download FASTA sequences of all ENSCAFG00000005339 retrocopies