RetrogeneDB ID: | retro_nleu_2865 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397456.1:1823340..1823729(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM183A | ||
Ensembl ID: | ENSNLEG00000013230 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.67 % |
Parental protein coverage: | 97.76 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MAGHPRQKVIPDEVHQNQILRELYLKELRTQKLYTQYHVNP-LRKIHT-VTRKPMSWHDNLEEPADARFL |
MAGHPR.KVI..EV.QNQIL.ELYLKEL..Q..Y...HVNP.L...H...TRKP.SWH.NLEEP.D.RF. | |
Retrocopy | MAGHPREKVIQGEVRQNQILQELYLKELPAQNVYAWHHVNP<LHEVHR<ITRKPTSWHGNLEEPGDTRFQ |
Parental | NLIHHAAQ-GPRKKYP-ETQTENQEVGWDLEPLINPERHDRRLNHFRVCSDITLYKAKTWGLGDD |
NLI.HAAQ.G.....P..TQTENQE..WD.EP..NPER.DRRLNH.RVCSDI.LYKA..W.LG.D | |
Retrocopy | NLICHAAQ<GTKEEGP<QTQTENQETAWDSEPWLNPERPDRRLNHCRVCSDIALYKAQMWSLGED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000005339 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000003315 | 1 retrocopy | |
Homo sapiens | ENSG00000186973 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000010892 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000013230 | 3 retrocopies |
retro_nleu_147, retro_nleu_2537, retro_nleu_2865 ,
|
Pongo abelii | ENSPPYG00000001457 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000000624 | 1 retrocopy |