Parental gene:

ENSCAFG00000006536

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:27:964405..972363(-)


>ENSCAFG00000006536
GTGGCAGGAGCCTTCAGGACTGAAGGTATGTTCATATCTCTTCAGGAACCCTCCCTGTATACTGTCAAAGCCATCCTGAT
TCTGGACAATGATGGAGATCGACTTTTTGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTG
AGAAGAACATTTTCAACAAGACCCATCGGACTGACAGTGAAATCGCCCTCTTGGAAGGCCTGACGGTGGTATACAAGAGC
AGTATCGATCTCTATTTCTATGTGATTGGCAGCTCCTATGAAAATGAGCTGATGCTCATGGCTGTTCTGAATTGCCTCTT
TGACTCATTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCTCTGCTGGAGAACATGGAGGGGCTCTTCTTGGCCG
TGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGTGATCCCCAGCAAGTGGTACACCGGGTGGCATTAAGGGGTGAA
GATGTCCCCCTCACGGAGCAGACCGTGTCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCACTCCTTCGGTG
A

Library Parental gene expression (RPM)
SRP012049_cerebellum 12 .77 RPM
SRP017611_brain 6 .03 RPM
SRP017611_kidney 18 .62 RPM
SRP017611_liver 4 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005384 possible_ortholog 1 retrogene
retro_btau_1500,
Callithrix jacchus ENSCJAG00000018887 possible_ortholog 2 retrogenes
retro_cjac_1771, retro_cjac_3951,
Echinops telfairi ENSETEG00000013499 possible_ortholog 1 retrogene
retro_etel_1782,
Microcebus murinus ENSMICG00000008401 possible_ortholog 1 retrogene
retro_mmur_757,
Mus musculus ENSMUSG00000060992 possible_ortholog 1 retrogene
retro_mmus_2439,
Oryctolagus cuniculus ENSOCUG00000013364 possible_ortholog 2 retrogenes
retro_ocun_1511, retro_ocun_797,
Otolemur garnettii ENSOGAG00000013468 ortholog_one2one 1 retrogene
retro_ogar_1768,
Rattus norvegicus ENSRNOG00000036835 possible_ortholog 1 retrogene
retro_rnor_2209,
Tupaia belangeri ENSTBEG00000008730 possible_ortholog 1 retrogene
retro_tbel_3749,
Tursiops truncatus ENSTTRG00000001654 possible_ortholog 2 retrogenes
retro_ttru_114, retro_ttru_856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_30 100.00 91.94
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Download FASTA sequences of all ENSCAFG00000006536 retrocopies