Parental gene: | COPZ1, ENSCJAG00000018887 |
| Aliases: | None |
| Description: | coatomer protein complex, subunit zeta 1 [Source:HGNC Symbol;Acc:2243] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:43271301..43352307(+) |
>ENSCJAG00000018887
ATGGAGGCGCTGATTTTGGAACCTTCCCTGTATACTGTCAAAGCCATCCTGATTCTGGACAATGATGGAGATCGACTTTT
TGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATC
GGACTGACAGTGAAATTGCACTCTTGGAAGGCCTGACAGTGGTATACAAAAGCAGTATAGATCTCTATTTCTATGTGATT
GGCAGCTCCTATGAAAATGAGCTGATGCTTATGGCTGTTCTGAACTGCCTCTTCGACTCATTGAGCCAGATGCTGAGGAA
AAATGTAGAAAAGCGAGCACTACTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGA
TCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTG
TCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCGCTCCTTCGGTGA
ATGGAGGCGCTGATTTTGGAACCTTCCCTGTATACTGTCAAAGCCATCCTGATTCTGGACAATGATGGAGATCGACTTTT
TGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATC
GGACTGACAGTGAAATTGCACTCTTGGAAGGCCTGACAGTGGTATACAAAAGCAGTATAGATCTCTATTTCTATGTGATT
GGCAGCTCCTATGAAAATGAGCTGATGCTTATGGCTGTTCTGAACTGCCTCTTCGACTCATTGAGCCAGATGCTGAGGAA
AAATGTAGAAAAGCGAGCACTACTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGA
TCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTG
TCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCGCTCCTTCGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 20 .92 RPM |
| SRP051959_skeletal_muscle | 18 .72 RPM |
| SRP051959_lymph_node | 24 .45 RPM |
| SRP051959_lung | 20 .63 RPM |
| SRP051959_liver | 25 .95 RPM |
| SRP051959_kidney | 28 .60 RPM |
| SRP051959_heart | 17 .42 RPM |
| SRP051959_colon | 22 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005384 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000006536 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013499 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000008401 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000060992 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013364 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000036835 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008730 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001654 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1771 | 89.69 | 54.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3951 | 95.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018887 retrocopies