Parental gene:

NT5DC2, ENSCAFG00000009184

Aliases:None
Description:5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:25717]
Organism:Dog (Canis familiaris)
Coordinates:20:37240459..37249769(+)


>ENSCAFG00000009184
GCCGCGGCGGGGCCGAGGGCAGGAGGACCAGGGCGGAGAGGGGGCAGGAGGACCCGGGGGCCGAGGGCGAGGCAGAGGGC
TGGGGCCGGGGCCGGGGCCGGAGGCCCCCCGGGGCCCGAAGCCCACTGCCCGGGCGCCTCGCACTCCGCGCCCGCCCCGG
CGCCCGCCGGCGGCGCCGAACTCAGCGCGCACCTGTGGGCGCGTTACCAGGACATGAGGAGGCTGGTGCACGACCTCCTG
CCCCCCGAGGTCTGCAGTCTCCTGAACCCAGCAGCCATCTATGCCAACAATGAGATAAGCCTGCGTGATGTGGAAGTCTA
TGGCTTTGACTATGACTACACGCTGGCCCAGTATGCAGACGCGCTGCACCCCGAGATCTTCAGTGCTGCCCGTGACATCC
TAATTGAGCACTACAAGTACCCAGAGGGGATCCGGAAGTATGACTATGACCCCAGCTTTGCCATCCGAGGCCTCCACTAC
GACATTCAGAAGAGCCTTCTGATGAAGATTGATGCCTTCCACTACGTGCAGCTGGGGACGGCCTACAGGGGCCTCCAGCC
TGTGCCTGATGAGGAGGTGATCGATTTATATGGGGGCACCCAGCATATCCCTCTGTACCAGATGAGCGGCTTCTATGGCA
AGGGTCCCTCCATCAAGCAGTTCATGGACATCTTCTCGCTGCCGGAGATGGCGCTGCTGTCCTGCGTGGTAGACCACTTT
CTGGGTCATGGCCTGGAGTTTGACCAAGCGCATCTCTACAAGGATGTAACGGATGCCATCCGAGATGTGCACGTGAAAGG
CCTCATGTACCAGTGGATTGAACGGGATATGGAGAAGTACATCCTGAGAGGGGACGAGACGTTCGCTGTCCTGAGCCGTC
TGGTGGCACATGGGAAACAGCTGTTCCTCATCACCAACAGCCCTTTCAGCTTTGTGGACAAGGGGATGAGGCACATGGTG
GGTCCCGACTGGCGTCAGCTCTTTGACGTGGTCATCGTCCAGGCTGACAAACCCAGCTTCTTCACTGACCGACGCAAGCC
TTTCAGAAAACTCGATGAGAAGGGCTCCCTGCACTGGGACCGCATCACCCGCCTGGAGAAGGGCAAAATCTACCGGCAGG
GAAACCTGTATGACTTCCTGCGCCTGACAGAATGGCGGGGACCCCGCGTGCTCTACTTTGGAGACCACCTGTACAGTGAC
CTGGCGGACCTTATGCTGCGGCACGGCTGGCGAACGGGTGCCATCATCCCCGAGCTGGAGCGCGAGATCCGCATCATCAA
CACGGAGCAGTATATGCACTCTCTGACGTGGCAGCAGGCGCTCACCGGGCTGCTGGAGCGCATGCAGACGTACCAGGATG
CTGAGTCGCGGCAGGTGCTGGCTGCCTGGATGAAGGAGCGCCAGGAGCTGAGGTGCATCACCAAGGCGCTGTTCAACGCT
CAGTTTGGGAGCATCTTTCGCACCTTCCACAACCCCACTTACTTCTCACGGCGCCTTGTGCGCTTCTCTGACCTCTACAT
GGCCTCCCTCAGCTGTCTGCTCAACTACCGGGTAGACTTCACCTTCTACCCACGCCGCACGCCCCTGCAGCATGAGGCAC
CGCTCTGGATGGACCAGCTCTGCACTGGCTGCATGAAGACGCCCTTTCTTAGCGACATGGCCCACATCCGTTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 103 .19 RPM
SRP017611_brain 9 .05 RPM
SRP017611_kidney 33 .02 RPM
SRP017611_liver 8 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008538 ortholog_one2one 1 retrogene
retro_amel_278,
Canis familiaris ENSCAFG00000010354 within_species_paralog 1 retrogene
retro_cfam_684,
Equus caballus ENSECAG00000015835 ortholog_one2one 1 retrogene
retro_ecab_805,
Myotis lucifugus ENSMLUG00000015418 ortholog_one2one 1 retrogene
retro_mluc_1559,
Tursiops truncatus ENSTTRG00000008562 ortholog_one2one 1 retrogene
retro_ttru_1120,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_418 81.70 66.61
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Download FASTA sequences of all ENSCAFG00000009184 retrocopies