Parental gene:

NT5C2, ENSCAFG00000010354

Aliases:None
Description:5'-nucleotidase, cytosolic II [Source:HGNC Symbol;Acc:8022]
Organism:Dog (Canis familiaris)
Coordinates:28:15526792..15605051(-)


>ENSCAFG00000010354
ATGACAACCTCCTGGAGTGATCGGTTACAGAATGCAGCTGATATGCCTGCTAACATGGATAAACATTCCCTGAAAAAGTA
TCGACGAGAAGCCTATCATCGGGTGTTTGTGAACCGAAGTTTAGCCATGGAAAAAATAAAGTGTTTTGGTTTTGATATGG
ATTATACACTTGCTGTGTACAAGTCCCCGGAGTATGAGTCTCTTGGCTTTGAGCTTACTGTGGAGAGATTAGTTTCTATT
GGCTACCCTCAGGAACTGCTCAGCTTTGCTTATGATTCTACATTCCCTACCAGGGGACTTGTTTTTGATACACTATATGG
AAATCTTTTGAAAGTTGATGCATATGGAAATCTTTTGGTCTGTGCACATGGATTCAACTTCATAAGAGGACCAGAAACTA
GAGAGCAGTATCCAAATAAATTTATCCAGCGAGATGACACTGAAAGATTTTACATTTTGAACACACTATTCAACCTACCA
GAGACCTACCTGTTGGCCTGCCTTGTAGATTTTTTTACTAATTGTCCTAGATATACCAGCTGTGAAACAGGATTTAAAGA
TGGGGACCTCTTCATGTCTTACCGAAGTATGTTCCAGGATGTAAGAGATGCTGTCGACTGGGTTCATTACAAGGGTTCCC
TTAAGGAAAAGACAGTTGAAAATCTTGAGAAGTATGTAGTCAAAGATGGAAAACTGCCTTTGCTTTTGAGCCGAATGAAA
GAAGTAGGGAAAGTGTTTCTTGCCACCAACAGTGACTATAAATATACAGATAAAATTATGACTTACCTGTTTGATTTCCC
ACATGGCCCCAAGCCTGGGAGTTCCCATCGACCATGGCAGTCCTATTTTGACCTGATTTTGGTGGATGCACGGAAGCCAC
TCTTTTTTGGAGAAGGCACTGTACTGCGTCAGGTGGATACTAAAACTGGCAAGCTGAAAATTGGTACCTACACAGGGCCC
TTACAGCATGGCATCGTCTACTCAGGAGGTTCATCAGATACAGTCTGTGATCTCTTGGGAGCCAAGGGCAAAGATATTTT
GTATATTGGAGATCACATTTTTGGAGACATTTTAAAATCAAAGAAACGGCAAGGGTGGCGAACTTTCTTGGTGATTCCTG
AACTTGCACAGGAGCTGCATGTCTGGACTGATAAGAGTGCACTTTTCGAAGAGCTTCAGAGCTTGGATATTTTCTTGGCT
GAACTCTACAAGCATCTTGACAGCAGCAGCAATGAGCGCCCAGACATTAGTTCCATTCAGAGACGTATTAAGAAAGTAAC
TCATGACATGGACATGTGCTATGGGATGATGGGAAGCCTGTTTCGCAGTGGCTCCCGACAGACCCTCTTTGCCAGTCAGG
TGATGCGATATGCTGATCTCTATGCAGCATCTTTCATCAACCTGCTGTATTATCCATTCAGCTACCTCTTCAGAGCTGCT
CATGTCTTGATGCCTCATGAATCAACGGTGGAACACACACATGTAGATATCAATGAGATGGAGTCCCCTCTTGCCACCCG
GAACCGCACATCAGTTGATTTCAAAGATACCGACTATAAGCGGCACCAGTTGACCCGGTCGATTAGTGAGATTAAACCCC
CCAACCTCTTCCCACTGGCCCCCCAGGAAATTACACACTGCCATGATGAAGATGATGATGAGGAAGAGGAAGAGGAAGAA
GAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 40 .28 RPM
SRP017611_brain 29 .38 RPM
SRP017611_kidney 69 .87 RPM
SRP017611_liver 29 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009184 within_species_paralog 1 retrogene
retro_cfam_418,
Choloepus hoffmanni ENSCHOG00000004098 ortholog_one2one 1 retrogene
retro_chof_280,
Microcebus murinus ENSMICG00000012316 ortholog_one2one 1 retrogene
retro_mmur_1476,
Rattus norvegicus ENSRNOG00000020179 ortholog_one2many 1 retrogene
retro_rnor_430,
Tupaia belangeri ENSTBEG00000017707 ortholog_one2one 4 retrogenes
retro_tbel_2188, retro_tbel_3201, retro_tbel_3465, retro_tbel_3467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_684 96.17 50.98
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Download FASTA sequences of all ENSCAFG00000010354 retrocopies