Parental gene:

AGPAT2, ENSCAFG00000019569

Aliases:None
Description:1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:325]
Organism:Dog (Canis familiaris)
Coordinates:9:48864491..48877154(+)


>ENSCAFG00000019569
ATGGAGCTGTGGCCGTGGGTGACCGCGGCGCTGCTGCTGCTGCTGCTGCTTGTGCAGCTGAGCCGCTCCGTCAGGTTCTA
CAGCAGGATCACTCTGTACTGCGCGCTCTGCGTCCTGGCCTCCACCGCCGCCTCGGTCGTCTGCCTGCTGCGCCACGGCG
GCCGGAGCGTGGAAAACATGAGGATCATCCAATGGTTTGTCCTGAGCTTCAAGTATGTATTTGGCCTTCGTTTCGAGATA
AAGGGTCGCCAGAAGCTGGAGTTGGACCACCCCTGTGTCATCATTTCTAACCACCAGAGCATCCTGGACATGATGGGCCT
TATGGAGGCCCTACCCGAGCGCTGTGTGCAGATCGCCAAGCGGGAGCTGCTCTTCTTGGGGCCTGTGGGCCTGATTATGT
ACCTCGGGGGCATCTTCTTCATCAACCGGCAGCACTCCAGGACCGCTGTCACCGTGATGGCCGATGTAGGCGAGCGCATG
GTCAGGGAGAATCTCAAAGTATGGATCTATCCTGAGGGCACACGGAATGACAATGGAGACCTGCTACCTTTCAAGAAAGG
TGCCTTCTACCTGGCCATCCAGACCCAGGTGCCTATCATCCCCATCGTCTACTCCAGCTTCTCCTCCTTCTACAACCCCA
AGACGAAGCTCTTCAGCTCAGGAACAATCAGGGTGGAGGTGCTGGATGCCATCCCCACCAGCGGCCTCACAGTCGCAGAC
GTCCCCAAGCTTATGGACACCTGCCACCAGGCCATGAGGACCACGTTCTTCCGCATATCCAAGATCGCCCAGGAGAATGG
GGCCACTGCGAGGCAGGGCTCCTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 2 .23 RPM
SRP017611_brain 1 .03 RPM
SRP017611_kidney 8 .19 RPM
SRP017611_liver 33 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003965 ortholog_one2one 1 retrogene
retro_amel_982,
Equus caballus ENSECAG00000010932 ortholog_one2one 1 retrogene
retro_ecab_825,
Felis catus ENSFCAG00000011607 ortholog_one2one 1 retrogene
retro_fcat_1778,
Mustela putorius furo ENSMPUG00000011249 ortholog_one2one 1 retrogene
retro_mputfur_1160,
Ochotona princeps ENSOPRG00000003291 ortholog_one2one 1 retrogene
retro_opri_578,
Ictidomys tridecemlineatus ENSSTOG00000023422 possible_ortholog 1 retrogene
retro_itri_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1838 59.61 71.53
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Download FASTA sequences of all ENSCAFG00000019569 retrocopies