Parental gene: | RABEPK, ENSCAFG00000020201 |
| Aliases: | None |
| Description: | Rab9 effector protein with kelch motifs [Source:HGNC Symbol;Acc:16896] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 9:57854497..57877922(-) |
>ENSCAFG00000020201
ATGAAACTGCTGCCAGTCTTGGAACCTGGAGACAAGCCCAGGAAAGCAACATGGTACACCTTGACCCCCCCTGGAGACAG
CCCCTGTGCTCGGGTTGGCCACAGCTGTTCATATTTACCCCCAGTTGGTGATGCCAAGAGAGGGAAGGTCTTCATTGTTG
GGGGAGCAGATCCGAACAGGAGCTTCTCAGATGTGTACACCATGGATCTGGGAACACACCGGTGGGACTTAGCCACCTCG
GAAGGCCTTTTGCCCCGGTACGAGCACGCCAGCTTCGTTCCCTCTTGCGCCCCTCATACCATCTGGGTGTTTGGAGGTGC
TGACCAGTCAGGAAATCGAAATTGCCTACAAATTCTGAATCCTGCAACCAGGACTTGGACCATGCCAGAGGTGACCAGTT
GTCCACCATCCCCAAGAACATTGCACACATCATCTGCAGCCATTGGAAACCAGCTGTATGTCTTCGGGGGTGGAGAGAGA
GGTGCCCAGCCTGTGCAGGATGTGAAGCTGCATGTGTTTGACGCAAACAGTCTGACCTGGTCACAGCCAGAGACACTTGG
AAAACCTCCATCCCCACGGCATGGTCATGTGATGGTGGCAGCAGGGACAAAGCTCTTCATCCATGGAGGCTTGGCAGGAG
ACAAATTCTATGATGATCTCCACTGCATTGATATACGTGATATGAAGTGGCAGGAGCTAAGTCCCACGGGGGCACCTCCC
ACAGGCTGTGCTGCCCACTCAGCTGTGGCTGTAGGGAAACACCTGTACATCTTTGGAGGGATGACTCCCACAGGAGCACT
GGATACAATGTACCAGTATCACATAGAAAAGCAGCATTGGACCTTGCTTAAATTTGATAATTTTCTACCCCCTGGACGAT
TGGATCATTCCATGTGTGTCATTCCATGGCCAGTGAGGTGTATGTCTGAGAAAGAAGATTCAAATTCTGCCACTCTAAAC
TATGATACTGAGGAAGGGGATTCCACCGACCAAGGAGTGACACAAGGTGGTGACTCACATGAGGAAAGCCAGACTGACAC
ACTGCTCTGTTTTGTGTTTGGCGGGATGAATACAGAAGGGGAAGTCTATAGTGACTGTATTGTGACTGTAGTTGACTAA
ATGAAACTGCTGCCAGTCTTGGAACCTGGAGACAAGCCCAGGAAAGCAACATGGTACACCTTGACCCCCCCTGGAGACAG
CCCCTGTGCTCGGGTTGGCCACAGCTGTTCATATTTACCCCCAGTTGGTGATGCCAAGAGAGGGAAGGTCTTCATTGTTG
GGGGAGCAGATCCGAACAGGAGCTTCTCAGATGTGTACACCATGGATCTGGGAACACACCGGTGGGACTTAGCCACCTCG
GAAGGCCTTTTGCCCCGGTACGAGCACGCCAGCTTCGTTCCCTCTTGCGCCCCTCATACCATCTGGGTGTTTGGAGGTGC
TGACCAGTCAGGAAATCGAAATTGCCTACAAATTCTGAATCCTGCAACCAGGACTTGGACCATGCCAGAGGTGACCAGTT
GTCCACCATCCCCAAGAACATTGCACACATCATCTGCAGCCATTGGAAACCAGCTGTATGTCTTCGGGGGTGGAGAGAGA
GGTGCCCAGCCTGTGCAGGATGTGAAGCTGCATGTGTTTGACGCAAACAGTCTGACCTGGTCACAGCCAGAGACACTTGG
AAAACCTCCATCCCCACGGCATGGTCATGTGATGGTGGCAGCAGGGACAAAGCTCTTCATCCATGGAGGCTTGGCAGGAG
ACAAATTCTATGATGATCTCCACTGCATTGATATACGTGATATGAAGTGGCAGGAGCTAAGTCCCACGGGGGCACCTCCC
ACAGGCTGTGCTGCCCACTCAGCTGTGGCTGTAGGGAAACACCTGTACATCTTTGGAGGGATGACTCCCACAGGAGCACT
GGATACAATGTACCAGTATCACATAGAAAAGCAGCATTGGACCTTGCTTAAATTTGATAATTTTCTACCCCCTGGACGAT
TGGATCATTCCATGTGTGTCATTCCATGGCCAGTGAGGTGTATGTCTGAGAAAGAAGATTCAAATTCTGCCACTCTAAAC
TATGATACTGAGGAAGGGGATTCCACCGACCAAGGAGTGACACAAGGTGGTGACTCACATGAGGAAAGCCAGACTGACAC
ACTGCTCTGTTTTGTGTTTGGCGGGATGAATACAGAAGGGGAAGTCTATAGTGACTGTATTGTGACTGTAGTTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 26 .36 RPM |
| SRP017611_kidney | 42 .59 RPM |
| SRP017611_liver | 18 .78 RPM |
| SRP012049_cerebellum | 44 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006849 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1704 | 73.71 | 60.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000020201 retrocopies